Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1996 ATGTCGGTATCATGTGGGGTAGAGTGCGTCTTCGTTCTCGGCTGCGCGCGCTGGCTCTGGAAACGCTGTACCTACGTCGGCTCCTACGACAGTGTCACGTGGCCAGCCGCCACAGCCGATGAGTTCGAGCCGGTACCACGTGTCTGCCGACTCATTCTCGCCATCTACGAACCGGATCTCCGAAACCCGCAGTACTATAAACCCGCAACCGGGTACGGGTTGAACCCGGATTGGGTCATAAAACGTGTCACTTACGAAGAAACACTCGGCCAAGCGCCGCCCTACATAATCTACGCCGATCACGAGCACCGCGAGATCGTGATGGCGGTGCGTGGACTCAATTTAGTGAAGGAGAGTGATTATAAGCTTCTTTTGGATAATCGATTGGGTAAGCAAATGTTCGATGGTGGGTATGTTCATCATGGGTTGCTGAAGTCTGCGGTTTGGTTGTTGAATCGTGAATCGGAGACTTTGAAGCGATTGTGGGTTGAGAATGGTTCGGATTATGGAATGGTTTTTGCGGGTCACTCTTTGGGGTCTGGTGTGGTTTCGTTGTTGACAATTCTTGTTGTGAATCATAGAGAGCGTTTGGGTGGAATTCCCAAAGAGAAGATTCGGTGTTATGCTCTTGCTCCTGCTCGTTGTATGTCTCTCAATTTGGCCGTTAAATATGCCAATGTCATTCACTCTATTATTTTGCAGGATGATTTCTTGCCAAGAACGGCCACTCCACTGGAAGATATATTCAAATCAATATTCTGTTTGCCCTGCTTATTATTCTTGGTTTGCCTGAGAGACACCTTTATACCCGAGGGTAGAAAGCTTGGGGATCCAAGGAGACTTTATGCACCAGGACGAATGTACCATATTGTTGAGAGAAAATTTTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACTGCCATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGTAATGCAACTTCAGATCATGGAATTATTTGGATTGAAAGAGAGGCAGAGAAAGCCTTACAATTAATGAAGGATCACAGCTCTAAAACTGTGACAGTCCCTCCAACTGTACGAAAGTTTGAGAGGTTGAAGACCATAGAAAAAGAACATAGAGATGCTTTGGAAAGGGCTGTTAGCTTAAATGTACCTCATGCAGTGGACACTGCAGAGGAAGAATCATCTAAAAAAAATGAAGGTGAGGCATCCAGTAGTGCAAGCAAGGACGCCTCAACTACCCAATCAAAATCAAGTCGGGGAAGGTCAACCTGGGATGAGGTGGTTCAAAAACTACTCAAGAATGAGACAGATCCACACCTGGAAAGGGATACACATGTCCCACAATAG 1347 0.4655 MSVSCGVECVFVLGCARWLWKRCTYVGSYDSVTWPAATADEFEPVPRVCRLILAIYEPDLRNPQYYKPATGYGLNPDWVIKRVTYEETLGQAPPYIIYADHEHREIVMAVRGLNLVKESDYKLLLDNRLGKQMFDGGYVHHGLLKSAVWLLNRESETLKRLWVENGSDYGMVFAGHSLGSGVVSLLTILVVNHRERLGGIPKEKIRCYALAPARCMSLNLAVKYANVIHSIILQDDFLPRTATPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLGDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHGIIWIEREAEKALQLMKDHSSKTVTVPPTVRKFERLKTIEKEHRDALERAVSLNVPHAVDTAEEESSKKNEGEASSSASKDASTTQSKSSRGRSTWDEVVQKLLKNETDPHLERDTHVPQ* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1996 448 Gene3D alpha/beta hydrolase 34 252 IPR029058 -
Apr10g1996 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 440 - -
Apr10g1996 448 CDD Lipase_3 41 240 - -
Apr10g1996 448 Pfam Lipase (class 3) 107 242 IPR002921 GO:0006629
Apr10g1996 448 MobiDBLite consensus disorder prediction 389 403 - -
Apr10g1996 448 Pfam Lipase 3 N-terminal region 7 70 IPR005592 GO:0016042
Apr10g1996 448 MobiDBLite consensus disorder prediction 375 448 - -
Apr10g1996 448 MobiDBLite consensus disorder prediction 426 448 - -
Apr10g1996 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 440 - -
Apr10g1996 448 MobiDBLite consensus disorder prediction 404 424 - -
Apr10g1996 448 SUPERFAMILY alpha/beta-Hydrolases 38 243 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1996 Apr-Chr10 32875226 32879756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1996 1 343 Miscellaneous Gene Families AT5G37710 76.093 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1996 - - gmx:100798831 777.319