Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1992 ATGGAGGACAACAGCGCAGACCAAGTGAAGCGATTGATGCAGAAAATCGCTGCAATTCTCGACGAGGCTCGAACCTCTTACGCCACGCACAACCGAAAGCTCAAGGAACTATCGCTCCTCCGATCCAAATCCGATTCCCCGTCGCACTTCTTCTCCGCCTTCTCCAAAACCGTAACTCCTCTCTTCGACTTCCAGAGGCGTCTCGCCTCCGCAGACCGCGTCGTCTCCTTCGTCTCCGCCTTCTTCCTTGAGCACTTCCTTAGGTTCCTCCTGGTTGCCGCCGCGGCAGCCAACAAAACTGCCAGGTTCCGAGCTTGCCAGATCGTCTCCGAGGTACGAATTCTCCGAATTGTCCGAGTAATCTCTACCTAATTGTGGTGTCTAGTGATTGTTTGGAATGAAAGTTTTCGACAATTGGTTGAATTGTAGATAATATTGCGGCTGCCAGATGATGCAGAAGTGAGCAATGACCTATGGGATGAGGTGATAGAGTGCATGATGGTGAGGGTACGAGACAAGATTCCTGTGGTGCGTACTTTTGCAGTTAGAGCGCTTTCGCGCTTTGTGAATGACTCTGTGAATAGTGACATTCTTTATTTTTTCCTCGAGATGCTTCCCTTGGAACAGAATGCGGACGTTCGTAAGATGATTGTGTTATCTTTGCCTCCTTCTAGTGCAACCTCTCAAGTTATCATTGATTGTACCTTGGATGTAAGTGAATCTGTACGCAAAGCAGCATACTGTGTTCTAGCCAATAAATTTCCTCTTCAAAGCTTAAGCATTAAACTTAGAACAGTAATTCTTCGGAGAGGACTTGCTGACCGATCTGTTGCTGTCTCAAAGGAATGTTTTAAACTATTGAAAGATGAATGGCTTATAAAATGTTGTAATGGTGATCCTTTAGAACTTTTGAAGTATCTTGATGTTGAAACATATGAATCAGTGAGTGAGTCTGTCATGGAAGCACTTCTTAAAGCTGATTTGGTAAAGCTACAGAATGATGCAAGTATCCAGCAGTATATATCATCAAATGGTGACACGACAGAAGGGGACTCAGTGCATTGCCCACCAAGTATTCAGCTACTGGAAGCAGAGGCAGCTCTTTATTGGAGAACTGTTTGCAAACATTTACAGTCAGAAGCACACGCCAAAGGCTCTGATGCTGCAGCAACAACGGGCACCGAAGCAGAAGTATATGCAACAGAAGCATCGGATAAAAATGACCTTCTAGAAAAAATTCTTCCTGCCACTGTTGATGAATATATAGAGTTAGTCAGAGCTCATATCAAAGCTGGATCAAATCATCGCTTTGCATGCCGGCAGCTGCTTTTACTTGGTGCCATGTTTGATTTTTCTGATGCTACAAATAGAAAGGTTGCCAGTACATTTCTGCATGAGCTAATGTGCAAGCCTCCTGAGTATGAGGATGACAATGAAGGTAATATAGTTATCCTTGGAGATGGATTAAGTTTTGGTGGAGACAGTGATTGGGCTGAAGCTGTAGCCAGTTTGGCTAGGAAGGTCCATGCTGCTCCTGGTGAATTTGAAGGAGTTGTTCTCGCAATCATAGAAGAGCTAGCTCAACCTTGCAGGGAGAGAACAGCAAATTATGTGCAGTGGATGCACAGCCTTTCTCTTACTGGCCTTTTGCTGAAAAATGCAAAATCACTGTGCTTTCTTCAGGGCAAGGCTATTGAACCAGATGAGCTACTCCAGTCTTTACTACTTCCTGGGGCGAAACAATCTCACTTGGATGTGCAAAGGATTGCCGTCAGATGCCTTGGCCTATTTGGACTTTTGGAGAGAAAACCAAGTGCAGAACTTTTGAAACAGCTGAGGATTTCATATATTAAGGGGCCACATTCAATCAGTATAGAGGCTTGTAAAGCATTAGTTGATCTTGTGATGTGGCATGGTCCTCCAGAAGTTGATAAGGTGTCAAAGCACAATATTCCATGCGAAATAAACAGTGAGAAGACGACTTTTTGTCCTGTGAACTTCTCTGATTCAGAAGGAGATCCGGATGTTGAGACCCTTGATATCTTGTATGGTGGCTTTGAAAATGATGACTGGGCGAGTCCTTTAACCAGCAATGAAGGCGAGTGCGTTTATGGTGTGCTTGGAGAGGGGTTTGCGAAAATTCTTCTCCTAAGTGACAAATATCCCAGCATACCAGCTTCTTTGCATCCTGTGCTTTTATCAAAGCTCATTTACTTGTACTTCAGTGACGTGTCGGAACACTTGCACAGGTGGTTAAAGCAATGCTTGTCGGTTTTCTTTGAGCTTTACCCATGTCTCTCAACCAATCATAAGGCAAGCATCTCTGATATTATATTTGCTCGTTGCATATCAAAGGCTTTCATTCCAGTAATGCGTTCAATGTGGCCAGGAATTTTCGGCAATTCTGCGGGTTCTTCTTTTATGGTGTCTCAGATGCGCAAGCGTGCTGTTCAAGCTTCCCGTTTTATGCTGCAGATGGTGCAGATTCCTTTATACGTTAAAGGGACTCAGCCAGAGAGTGAAAATAGTAGCACGGAACATCCACAAGTCATAGATAGTTGCGCAGAAGTTCCATTTGAGTGTGGGGAGGAGGGGCTTGCACTACGCATAGCCGTAGAGATGGCAAATTTTCAATCGAAGAAGACAGCAGCTGAGAAGTCATATGTATCGGCATTATGTAGAATACTTGTTCTGCTTCAATTTCGGTTATCTGAACAAGGACCAATAAAATTTATGAGGAGGCTTTTATATCGCGTGGTTGAATGTGTATCTTCGGAGAAGGATCTTGTTAAAGAATTGAAACGGATGGCTGAACATCTCACGACACTAGATAGACAACCGGATCAGGAATTGTTGCAAGATGAAATTATTCTCATTTTGGGGAAATTGGAACTTGACTGCAACGTGGATTTGGATGGTTCTGTTGCAATGCTACAAACACCAGCTGTACACCCAACTAGACCCTCACGTTCTAGGAGAAGGGTAAGGATTGAGGAAGGCAGTTCTGATGAATCTTCACCTTCTGTGGTTCCTTCCACCCATCATACTGTAAAAAGTCGCTCACAAAGAGCTAGCAAAACTGCAGCAATGAACAAGATGTCTTCTGCTCGTAGACCGCTCAAAATTGATGAAATTGAAGACCAAGAGGAAGAAAACTCTGATGTGACATCTGAAGATTCTGACGAATCCGATCAGTACAGTTAA 3204 0.4388 MEDNSADQVKRLMQKIAAILDEARTSYATHNRKLKELSLLRSKSDSPSHFFSAFSKTVTPLFDFQRRLASADRVVSFVSAFFLEHFLRFLLVAAAAANKTARFRACQIVSEVRILRIVRVIST*LWCLVIVWNESFRQLVEL*IILRLPDDAEVSNDLWDEVIECMMVRVRDKIPVVRTFAVRALSRFVNDSVNSDILYFFLEMLPLEQNADVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPLQSLSIKLRTVILRRGLADRSVAVSKECFKLLKDEWLIKCCNGDPLELLKYLDVETYESVSESVMEALLKADLVKLQNDASIQQYISSNGDTTEGDSVHCPPSIQLLEAEAALYWRTVCKHLQSEAHAKGSDAAATTGTEAEVYATEASDKNDLLEKILPATVDEYIELVRAHIKAGSNHRFACRQLLLLGAMFDFSDATNRKVASTFLHELMCKPPEYEDDNEGNIVILGDGLSFGGDSDWAEAVASLARKVHAAPGEFEGVVLAIIEELAQPCRERTANYVQWMHSLSLTGLLLKNAKSLCFLQGKAIEPDELLQSLLLPGAKQSHLDVQRIAVRCLGLFGLLERKPSAELLKQLRISYIKGPHSISIEACKALVDLVMWHGPPEVDKVSKHNIPCEINSEKTTFCPVNFSDSEGDPDVETLDILYGGFENDDWASPLTSNEGECVYGVLGEGFAKILLLSDKYPSIPASLHPVLLSKLIYLYFSDVSEHLHRWLKQCLSVFFELYPCLSTNHKASISDIIFARCISKAFIPVMRSMWPGIFGNSAGSSFMVSQMRKRAVQASRFMLQMVQIPLYVKGTQPESENSSTEHPQVIDSCAEVPFECGEEGLALRIAVEMANFQSKKTAAEKSYVSALCRILVLLQFRLSEQGPIKFMRRLLYRVVECVSSEKDLVKELKRMAEHLTTLDRQPDQELLQDEIILILGKLELDCNVDLDGSVAMLQTPAVHPTRPSRSRRRVRIEEGSSDESSPSVVPSTHHTVKSRSQRASKTAAMNKMSSARRPLKIDEIEDQEEENSDVTSEDSDESDQYS* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1992 1065 MobiDBLite consensus disorder prediction 978 1065 - -
Apr10g1992 1065 Pfam Nuclear condensing complex subunits, C-term domain 541 899 IPR025977 -
Apr10g1992 1065 MobiDBLite consensus disorder prediction 1000 1030 - -
Apr10g1992 1065 PANTHER CONDENSIN COMPLEX SUBUNIT 3 8 112 - -
Apr10g1992 1065 PANTHER CONDENSIN COMPLEX SUBUNIT 3 137 1050 - -
Apr10g1992 1065 SUPERFAMILY ARM repeat 154 930 IPR016024 -
Apr10g1992 1065 MobiDBLite consensus disorder prediction 1044 1065 - -
Apr10g1992 1065 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 8 112 IPR027165 GO:0000796|GO:0007076
Apr10g1992 1065 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 137 1050 IPR027165 GO:0000796|GO:0007076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1992 K06678 - gmx:100817677 1664.43