Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1985 ATGGCGCAAACGTTATTCTCGCTGTTCTTCCTCTTCTCCCTCTTTCACCTTCCCTCCTGCTTCTCTGGTCAATCCAGCTCCATGGAATCAGTTCCTGACCTTCAGAACACCATGTACGCGGTCATCGATGGATATCCTTGTGTGCGTCTGCTAAATCTTTCTGGACCTGTTGGTTGTTCAAATCCTGGGCGAGATAAGGTTGTGGCTCCAATAGTAAGGTTTGAAAATGTTGTTGAGCTATCGCAGCCATCTGCTATATTGGTGTCATTGGATGATTTTCCGACTCTCTTTACCAGAATATCGGATGACTTAAGCTTTGCAAGTAAAGTTGGTGGTGTACTAGTTGAACCGAAAACTGTTTTGCAGAATAAGTTACAGGGATTATCTCCTGATCTGAAGTTCCCACAAGCTCAATTTGCTCCTTATCATAATATCAGCTACGAATGGAATCCAATTGGTTCTGGTATTATGTGGCAATCCTATGGCTTTCCTGTGTTCTTACTTGCAGAAAGTGGCACAAAGACTCTTCAAGAGTTTGTAACAAAGAATGAGGACAAAAAGAAAGCTTATACTTACAATGTGGCTGAGTTTGATCTGGTGATGCAGACAGTAAAATCTGGAACACATGATTCAGAATCTTGTTTAAAAGAAGCAACTTGCCTCCCTTTAGGTGGATACAGTGTCTGGTCATCTCTTCCTCCAATCAACATCACATCCTTAAAACAGTCTAAGCCCATTATATTGACTGTGGCATCTATGGATTCTGCTTCGTTTTTTCGAGATAAAAGCCTTGGTGCAGACTCCCCTATTTCTGGTTTAATTGCATTACTGGCAGTTGTTGATGCACTTTCCCATTTGGATGGTCTTGATGTCCTTAGTAAACAGTTTGTTTTTGCTGTTTTCACTGGAGAGGCATGGGGTTACCTTGGAAGTAGGAGATTTTTGGTAGAACTTGACATGCACTCAGATGCTGTTAATGGCCTTAATCATACATTAATTGAAACGGTCATTGAAATTGGTTCTGTTGGAAAGGGTCTCAATCAAGGTGTTAAAAACTTTTTTGCTCATACAGAAGGGGATTCCTCTGCCACAAATCTGACAATGACTGCCTTGAAACGTGCACAAGAGTCACTTCTATCTGAAAACATAAAGATAGCTTCTGCAAGTGCCTCAAATCCTGGGATACCTCCATCCTCTTTAATGACCTTTTTGGAAAAGAATCCTGCAATCTCTGGTATTGTCTTAGAAGATTTTGACTCTGTCTTTGTCAACAAATTCTACCATAGTCACCTTGATGATATATCAAATGTAAATTCATCAGCAATAGTTGCTGCTGCTTCTCTTATTGCCCGAACCATTTACCTGCTTGCAAGTGAAATTAAAGATGTACAAGATTCTACTTTGGCTGCCATAAATGTAAATGCCTCACTTGTTGAACAACTTATGGGTTGCTTGTTGGACTGTGATCCTGGTCTTTCTTGCGAATTGGTGAAGAAATATATTTCACCCACGTCAACCTGTCCGAGCCATTATGTTGGTGTTATCTTAGATGAACCTTCATCGACCCCTAATACAGGATACATTAATGATGTTCCCAGGTTCATCTGGAATTTTCTAGCTGATAGAACTTCTATCCCAGGGGAGAATAATAACTCAGATTGTCATCAAGGTTGCCATGGCAAAGATGAAGTTTGCATTAAAGCGGAGACTGATGAGAAGGGAATTTGTGTTCTCTCTACAACAAGGTATGTTCCAGCATATTCAACACGGCTAAAATTTGAATCAGGAGTGTGGAATGTTTTGCCCCCTAATTCCTCTGACAAAATGGGGATTGTGGACCCTGTCTGGACAGAAAGCAACTGGAATTCAATAGGTATGCGGGTCTACACAGTCCAAATTGCTGCTTACGATCGTCTTGTTCTATTAGGGGGTATCACTCTGACAATCTTGGCATACCTTGCAATAGCAATGACAAGAGCTTTTGTTACCAAAGCCATGAAGAGGGATTGA 2010 0.41 MAQTLFSLFFLFSLFHLPSCFSGQSSSMESVPDLQNTMYAVIDGYPCVRLLNLSGPVGCSNPGRDKVVAPIVRFENVVELSQPSAILVSLDDFPTLFTRISDDLSFASKVGGVLVEPKTVLQNKLQGLSPDLKFPQAQFAPYHNISYEWNPIGSGIMWQSYGFPVFLLAESGTKTLQEFVTKNEDKKKAYTYNVAEFDLVMQTVKSGTHDSESCLKEATCLPLGGYSVWSSLPPINITSLKQSKPIILTVASMDSASFFRDKSLGADSPISGLIALLAVVDALSHLDGLDVLSKQFVFAVFTGEAWGYLGSRRFLVELDMHSDAVNGLNHTLIETVIEIGSVGKGLNQGVKNFFAHTEGDSSATNLTMTALKRAQESLLSENIKIASASASNPGIPPSSLMTFLEKNPAISGIVLEDFDSVFVNKFYHSHLDDISNVNSSAIVAAASLIARTIYLLASEIKDVQDSTLAAINVNASLVEQLMGCLLDCDPGLSCELVKKYISPTSTCPSHYVGVILDEPSSTPNTGYINDVPRFIWNFLADRTSIPGENNNSDCHQGCHGKDEVCIKAETDEKGICVLSTTRYVPAYSTRLKFESGVWNVLPPNSSDKMGIVDPVWTESNWNSIGMRVYTVQIAAYDRLVLLGGITLTILAYLAIAMTRAFVTKAMKRD* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1985 669 Pfam Nicastrin 245 454 - -
Apr10g1985 669 Pfam Nicastrin small lobe 46 203 IPR041084 -
Apr10g1985 669 PANTHER NICASTRIN 17 668 IPR008710 GO:0016021|GO:0016485
Apr10g1985 669 SUPERFAMILY Zn-dependent exopeptidases 219 454 - -
Apr10g1985 669 Gene3D Zn peptidases 170 471 - -
Apr10g1985 669 CDD M28_Nicastrin 40 622 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1985 K06171 - gmx:100818367 1147.5