Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1974 ATGGAGAAAGCAAGCACTAAATCTGCTTTGAAGACAAAAGATATACTCAAAGACAGCAAGTTCTTCGACAAGACAAAAGTGAGTAACATGGCTTCAAGAAGGTCTCCACCCAAAGAAAATACCAAACCACAAGAATTCAAACTGCACACCCAAGAAAGAGCTGTCAAACGTGCAATGTTCAACTATGCTGTGACAACAAAATTCTATATCATGGAGCTGCAAAAGAAACAAGAGGAGAAGCTGCAAAAGATGATTGAAGAGGAAGAAATTCGTTTGCTAAGGAAGGAAATGGTTCCAAGAGCTCAATTGATGCCTTATTTTGATAAGCCATTCTGCCCACAAAGATCAAGCAGGACAGTTCCAAGAGAATCATGCCTCCACATGATGAGTAGCAAGTGCTGGAGTTGCACTGTTGGAAGTGAAATCTACATTAAGTAG 438 0.4018 MEKASTKSALKTKDILKDSKFFDKTKVSNMASRRSPPKENTKPQEFKLHTQERAVKRAMFNYAVTTKFYIMELQKKQEEKLQKMIEEEEIRLLRKEMVPRAQLMPYFDKPFCPQRSSRTVPRESCLHMMSSKCWSCTVGSEIYIK* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1974 145 Pfam Targeting protein for Xklp2 (TPX2) domain 46 118 IPR027329 -
Apr10g1974 145 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 5 143 - -
Apr10g1974 145 Coils Coil 70 96 - -
Apr10g1974 145 PANTHER TARGETING PROTEIN FOR XKLP2 5 143 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1974 Apr-Chr10 32648742 32651383 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1974 - - gmx:100305850 212.231