Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1687 ATGGCAGAGTTACCAGGATATTTTCGTTACTGCTTAAACACAGGGAAACTTGTCCTTCTGGCAATTTTGGTCTCCGGAGGAGTCGTCTTGCAAATTTTGGCATGTGCCTTGTATAATAATTGGTGGCCAATGATAACCGCCATAACATATGTTCTTCTTCCAATGCCTTTGCTGTTCTTTGCGGGATCTGAAAGTTCTTTATTTTCTGAATCAGATAGCAGGTGGGTGAATGCAACCAAGTTCTTAACTGGAGCTTCAGCTGTTGGAAGCATTGCCATTCCAACCATTTTAAAGCATTCTGGAGTTATTGGTTGGGGAGCCCTTGCTATGGAATTCTCTTCCTTCTTTGTGTTTGTATTAGCCATGATGTGTTACATTCGGATGAATGGCGAAGATGATTACAGTATACTTTGA 414 0.413 MAELPGYFRYCLNTGKLVLLAILVSGGVVLQILACALYNNWWPMITAITYVLLPMPLLFFAGSESSLFSESDSRWVNATKFLTGASAVGSIAIPTILKHSGVIGWGALAMEFSSFFVFVLAMMCYIRMNGEDDYSIL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1687 137 Pfam Vacuolar protein sorting 55 17 132 IPR007262 -
Apr10g1687 137 PANTHER LEPTIN RECEPTOR-RELATED 1 134 IPR007262 -
Apr10g1687 137 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1687 Apr-Chr10 29619392 29620326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1687 1 134 EF-hand Containing Proteins AT1G32410 66.912 2.67e-64 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1687 - - gmx:100775400 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0765 7 14600937 14603250 Apr10g1687 10 29619392 29620326 PCT