Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1680 ATGAAATTCGCTTTATATATTGTGATTCTCTTTATCTTTCTCTTTCAATGCTCGAATGGCTCTAATCTTATCCTTCAATCTTGCAGAGAGGCCTCCAAGAACGACCCAAATTTGAGCTATGATTTCTGTGTTGCATCCCTCAAAGATGCCTCCTCCAAGTGGCAACCAGCACCCTCCAACCTCGAAGATCTTGTGGGCATGTCAATTCAGCTAACAAAATCCAACGGAACCAAAATGGTTTGCATAATTTCGGAGCACTTGAAGAACAAAAGTTTTGATCAATATAGTAAGGCTTGTCTAAGGGATTGCTTTGATCTCTATAAGGATTCCCTTTCAGCTTTAGAAGATGCCATGGTTGCTTTCAAGTTCAAGGATTTGGACACGGCTGGTATACACGTGAGTGCTTCCTTGGATGACTCAGTTACCTGTGAAGATCAGTTCAAAGATAAGAAAGGTGAAATGTCCCCTTTAACAAAGGAGAACCACGTTTACTTTGAACTCAATGTAATATCTTTGGCTTTTATCCAAATGTTCCGCCAAAATTATTGA 549 0.3989 MKFALYIVILFIFLFQCSNGSNLILQSCREASKNDPNLSYDFCVASLKDASSKWQPAPSNLEDLVGMSIQLTKSNGTKMVCIISEHLKNKSFDQYSKACLRDCFDLYKDSLSALEDAMVAFKFKDLDTAGIHVSASLDDSVTCEDQFKDKKGEMSPLTKENHVYFELNVISLAFIQMFRQNY* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1680 182 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 177 IPR006501 GO:0004857
Apr10g1680 182 CDD PMEI-Pla_a_1_like 28 177 IPR034088 -
Apr10g1680 182 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 178 - -
Apr10g1680 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 22 178 IPR035513 -
Apr10g1680 182 SMART PMEI_2 19 174 IPR006501 GO:0004857
Apr10g1680 182 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 13 178 - -
Apr10g1680 182 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Apr10g1680 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 19 178 IPR035513 -
Apr10g1680 182 Pfam Plant invertase/pectin methylesterase inhibitor 23 173 IPR006501 GO:0004857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1680 - - gmx:100817110 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1680 10 29567403 29567951 Apr10g1680 10 29567403 29567951 ECH