Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1666 ATGCGTCACCACCACAAGCCGGAGCTTCACATCGGAAAACAAAACTTGGACCTCTCTTCCGATATCACTTCCTTCTCTCCAAACCTACCAAGTCTCTGCCACCATGAACACTTCTCCAATAACCCATCTCAAATTTCTCCACTCTCTTCACCCCACAACACACCTACAATGACCCTCCCTTACCCTTCATTCCCAACACCCTTTGCTTCAAAGTTTCTAACTTCAAACCTTTTCACTCGTTTCCGTTTTCTTATTCTTCTCCCCCTTCCTTCCCTCTCTCTCTACTTCCTTGTTTCAAATCCTAGCCCTTTAGATTTCTTTTCTGTGATCGCTTTCTCAGTAGCACTCTTCATTTCCCTTAATCTCGCACTCCCCCGTTTACCCTCTATTTGCATGTTCTTCACTCGATCGTTACCCACCAACCTCTCTTCATCTTCTTCTTCTTCCTCTTCCCCTGTTGTATGGTCTATTGGGTCGAAGCCCAATCAAGTAAAGAACAAAACTTCGGGGTGTTGGGTGCAAGTTTATAGCAATGGGGATGTGTACGAGGGTGAATTCCACATGGGAAAGTGTTGGGGTAGTGGGGTATATCACTATCACATGAGTGGAAGATACGAGGGTGATTGGGTTGATGGGAAGTATGATGGGTATGGTGTTGAGACATGGGCAAGAGGAAGCAGATATCGTGGGCAATATAGGCAAGGTTTGAGGCATGGAATCGGAATCTATAGGTTCTATAGTGGCGATGTGTTTGCTGGTGAGTGGTCTAATGGACAGTGTCATGGGTTTGGTGTTCATACTTGCAGTGATGGGAGCCGTTATGTTGGGGAATTCAAGTGGGGTGTCAAACATGGACTTGGCCAGTATCATTTCAGAAATGGGGACATATATGCTGGAGAATATTTTGCAGACAAGATGCATGGTTTTGGAGTGTATCAATTTCAGAATGGTCATCAGTATGAGGGGGCATGGCATGAAGGAAGAAGACAAGGACTGGGAAGGTACACTTTCAGAAATGGGGAAACACAATGTGGTCACTGGCAGAATGGGATTCTTGATGGTCCTAAAAGACAAAATAATTGTACCGGGTCGCCATGTGCTGTGGACCATGCCAAGGTTTTAAATGCAGTACAGGATGCACATTGTGCTGCTGAGAAAGCTCACAATATGGCAAATTTGGATGATGGGGTGAACAAAGTAGCCGCTGCAGCTAATAAAGCAGCGAATGCAGCCAGAGTCGCAGCTGTAAAGGCTGTGCAAAGTAGTATGCACCATAATAATAATAATAATAATGATAAATGA 1302 0.4485 MRHHHKPELHIGKQNLDLSSDITSFSPNLPSLCHHEHFSNNPSQISPLSSPHNTPTMTLPYPSFPTPFASKFLTSNLFTRFRFLILLPLPSLSLYFLVSNPSPLDFFSVIAFSVALFISLNLALPRLPSICMFFTRSLPTNLSSSSSSSSSPVVWSIGSKPNQVKNKTSGCWVQVYSNGDVYEGEFHMGKCWGSGVYHYHMSGRYEGDWVDGKYDGYGVETWARGSRYRGQYRQGLRHGIGIYRFYSGDVFAGEWSNGQCHGFGVHTCSDGSRYVGEFKWGVKHGLGQYHFRNGDIYAGEYFADKMHGFGVYQFQNGHQYEGAWHEGRRQGLGRYTFRNGETQCGHWQNGILDGPKRQNNCTGSPCAVDHAKVLNAVQDAHCAAEKAHNMANLDDGVNKVAAAANKAANAARVAAVKAVQSSMHHNNNNNNDK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1666 433 PANTHER MORN REPEAT PROTEIN 41 425 - -
Apr10g1666 433 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 247 358 - -
Apr10g1666 433 Gene3D - 164 211 - -
Apr10g1666 433 Gene3D - 303 367 - -
Apr10g1666 433 Gene3D - 257 302 - -
Apr10g1666 433 Gene3D - 212 256 - -
Apr10g1666 433 Pfam MORN repeat 251 273 IPR003409 -
Apr10g1666 433 Pfam MORN repeat 320 341 IPR003409 -
Apr10g1666 433 Pfam MORN repeat 182 200 IPR003409 -
Apr10g1666 433 Pfam MORN repeat 297 318 IPR003409 -
Apr10g1666 433 Pfam MORN repeat 228 250 IPR003409 -
Apr10g1666 433 Pfam MORN repeat 205 227 IPR003409 -
Apr10g1666 433 Pfam MORN repeat 274 295 IPR003409 -
Apr10g1666 433 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 41 425 - -
Apr10g1666 433 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 164 274 - -
Apr10g1666 433 SMART morn 226 247 IPR003409 -
Apr10g1666 433 SMART morn 295 316 IPR003409 -
Apr10g1666 433 SMART morn 272 293 IPR003409 -
Apr10g1666 433 SMART morn 180 201 IPR003409 -
Apr10g1666 433 SMART morn 318 339 IPR003409 -
Apr10g1666 433 SMART morn 249 270 IPR003409 -
Apr10g1666 433 SMART morn 203 224 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1666 Apr-Chr10 29377187 29381578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1666 174 423 Acyl Lipid Metabolism Gene Families AT1G60890 31.200 4.69e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1666 - - pvu:PHAVU_003G226200g 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1666 10 29377187 29381578 Apr10g1666 10 29377187 29381578 ECH