Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1586 ATGGCTTCAAAGGCTGGTATTCTTCTTGCTCTCAACCTACTCTTCTTCACTGTGGTTAGCTCCTCATATGTTCCAACTACTCCATGCCCTCCACAACCCCCAAAAGGACACAAACACCTACCTGCCCCATACACACCTTACCCAAAGCAACCCGGTTGCCCTAAGGACGCCATTAAGTTCGGTGTGTGTGCTAATGTGTTGAATTTGGTGAACGTGAAACTTGGCGACCCAGCAGTGACCCCGTGTTGCTCTCTCCTTGGCAACCTGGTTGACCTTGAAGCTGCTGTGTGCCTTTGCACTGCTCTCAAAGCCAATGTGTTGGGCATCAACCTCGACATTCCTTTAAGCTTGAGCTTGCTACTCAACGTTTGTCAAATGGAGGTTCCTGAGCATTACAAGTGCGCTTAA 408 0.4926 MASKAGILLALNLLFFTVVSSSYVPTTPCPPQPPKGHKHLPAPYTPYPKQPGCPKDAIKFGVCANVLNLVNVKLGDPAVTPCCSLLGNLVDLEAAVCLCTALKANVLGINLDIPLSLSLLLNVCQMEVPEHYKCA* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1586 135 Pfam Hydrophobic seed protein 53 135 IPR027923 -
Apr10g1586 135 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 56 134 IPR036312 -
Apr10g1586 135 CDD HPS_like 51 134 IPR027923 -
Apr10g1586 135 PANTHER - 1 135 - -
Apr10g1586 135 SMART aai_6 53 134 IPR016140 -
Apr10g1586 135 Gene3D - 52 135 IPR036312 -
Apr10g1586 135 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1586 Apr-Chr10 28418647 28419054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1586 46 134 Acyl Lipid Metabolism Gene Families AT4G22520 32.584 6.71e-13 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1586 - - gmx:100500229 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1586 10 28418647 28419054 Apr10g1586 10 28418647 28419054 ECH