Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1585 ATGTCTTCAAAATCGAAAGCTAAAGCTTTAATATTCATCTTGAAACTATTAATGTTGAATGCTTTGCCGCCAATTCATGCATGTGGGCCCTGCACTCACCCACGTCCACCATACCACAGGCCAAGTCATCCCAAAAAACCGCCGCATCACGGCGGAGGCCGGCCAAAAGTCTCCCCTCCTATGCCGCCGGTGATCGTGCCACCGATCATAGTCAATCCTCCATTGCTACCCCCGCCGGTGACATACCCTCCACCAACCTCCCCGTACCCGCCGCCACACGGTGGTGGTCCTCCTCCTCAACGAACTTGTCCAATCGATGCCTTAAAGTTAGGGCTTTGTTTGGATGTGCTTGGAGGATTGGTGCATGTGGGAATAGGGAACCCGCTTGAGAACGTGTGTTGTCCCGTGATTCAAGGGTTGCTTGATCTTGAAGCAGCGATTTGTCTTTGCACCGTTATTAGGGCTAAACTTCTTAATCTCAATGTCTTCATTCCTCTTGCACTTCAAGTCTTGATAACTTGCGGGAAGACTCCTCCACCTGGTTTTGTTTGTCCACCTCTCTAA 564 0.5035 MSSKSKAKALIFILKLLMLNALPPIHACGPCTHPRPPYHRPSHPKKPPHHGGGRPKVSPPMPPVIVPPIIVNPPLLPPPVTYPPPTSPYPPPHGGGPPPQRTCPIDALKLGLCLDVLGGLVHVGIGNPLENVCCPVIQGLLDLEAAICLCTVIRAKLLNLNVFIPLALQVLITCGKTPPPGFVCPPL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1585 187 MobiDBLite consensus disorder prediction 36 58 - -
Apr10g1585 187 Pfam Hydrophobic seed protein 102 185 IPR027923 -
Apr10g1585 187 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 105 186 IPR036312 -
Apr10g1585 187 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 5 186 - -
Apr10g1585 187 Gene3D - 100 186 IPR036312 -
Apr10g1585 187 PANTHER - 5 186 - -
Apr10g1585 187 CDD HPS_like 102 184 IPR027923 -
Apr10g1585 187 MobiDBLite consensus disorder prediction 38 52 - -
Apr10g1585 187 SMART aai_6 103 184 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1585 Apr-Chr10 28409526 28410089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1585 86 186 Acyl Lipid Metabolism Gene Families AT4G22490 32.673 2.63e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1585 - - gmx:100807391 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1585 10 28409526 28410089 Apr10g1585 10 28409526 28410089 ECH