Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1584 ATGGCTTCCAAAACTTGTTCCTCATCACTTGCTCTTTTCCTCACACTCAACCTTCTCTTCTTTGCACTTGTCTCGGCTTGTGGTAGTAATTGTAAATGTCCTGGTCCATACCCAAATCCCTGCCCTTCATCAAGTGGCACTTGCCCTCGTGATGCACTCAAACTAGGGGTATGCGCCAATGTGCTAAACGGGTTGCTGAACGTGACTTTGGGTCAACCACCAGTGACCCCTTGTTGTTCCCTCCTTGAAGGCCTTGCTGACCTCGAAGCTGCAGTGTGCCTTTGCACTGCCCTTAAAGCAAACATTTTGGGCATTAACCTTAACCTTCCCATATCACTCAGCTTGCTCCTCAATGTTTGCTCAAGGCAAGTCCCACATGACTTTCAATGTGCCTAA 396 0.4823 MASKTCSSSLALFLTLNLLFFALVSACGSNCKCPGPYPNPCPSSSGTCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLEGLADLEAAVCLCTALKANILGINLNLPISLSLLLNVCSRQVPHDFQCA* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1584 131 Pfam Hydrophobic seed protein 47 131 IPR027923 -
Apr10g1584 131 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 50 130 IPR036312 -
Apr10g1584 131 Gene3D - 47 131 IPR036312 -
Apr10g1584 131 PANTHER - 8 131 - -
Apr10g1584 131 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Apr10g1584 131 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 8 131 - -
Apr10g1584 131 CDD HPS_like 46 130 IPR027923 -
Apr10g1584 131 SMART aai_6 48 130 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1584 Apr-Chr10 28402286 28402681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1584 40 130 Acyl Lipid Metabolism Gene Families AT4G22490 39.130 8.04e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1584 - - gmx:100801985 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1584 10 28402286 28402681 Apr10g1584 10 28402286 28402681 ECH