Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1583 ATGGCCACCAAAACTAGCTCCTCCGTTGCTTTTTTCCTCACCCTCAACATCCTCTTCTTTGCACTTGTCTCTGCTTGCAGCACGTGCTATGGTCCAACTCCAAACCCAAGGCCGAATCCCAGGCCAAGGCCAAGGCCCAGCCCTTCAGGTGGTTCAAGCCCATCGGGTGGCTCTAGCCCATCTGGAGGGTCTAGTCCTTCAGGTGGCTCCACCCCCTCGGGTGGTTCTAGCCCTTCAGGAGGCACGTGCCCTCGTGATGCACTCAAACTTGGGGTATGCGCAAATGTGCTAAACGGGTTGGTGAATGTGACATTGGGTCAACCACCAGTGACCCCTTGCTGCTCCCTTCTCGACGGCCTCGTTGACCTTGAGGCGGCAGTGTGCCTCTGCACTGCACTCAGAGCAAACATTCTGGGCATTAACCTTAACCTTCCCATCTCACTCAGCTTGCTCCTTAACGTTTGCTCAAGACAAGTCCCACGTAACTTCCAGTGTGCCTAA 501 0.5529 MATKTSSSVAFFLTLNILFFALVSACSTCYGPTPNPRPNPRPRPRPSPSGGSSPSGGSSPSGGSSPSGGSTPSGGSSPSGGTCPRDALKLGVCANVLNGLVNVTLGQPPVTPCCSLLDGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSRQVPRNFQCA* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1583 166 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 85 165 IPR036312 -
Apr10g1583 166 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 68 166 - -
Apr10g1583 166 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 7 48 - -
Apr10g1583 166 MobiDBLite consensus disorder prediction 32 82 - -
Apr10g1583 166 SMART aai_6 83 165 IPR016140 -
Apr10g1583 166 CDD HPS_like 82 165 IPR027923 -
Apr10g1583 166 Pfam Hydrophobic seed protein 82 166 IPR027923 -
Apr10g1583 166 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Apr10g1583 166 MobiDBLite consensus disorder prediction 33 49 - -
Apr10g1583 166 Gene3D - 82 166 IPR036312 -
Apr10g1583 166 PANTHER - 7 48 - -
Apr10g1583 166 PANTHER - 68 166 - -
Apr10g1583 166 MobiDBLite consensus disorder prediction 50 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1583 Apr-Chr10 28393865 28394365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1583 81 165 Acyl Lipid Metabolism Gene Families AT4G22490 41.176 7.68e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1583 - - gmx:100798361 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1583 10 28393865 28394365 Apr10g1583 10 28393865 28394365 ECH