Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1582 ATGGATTCTTCTAGATCTTCAACTCTCGGTCTGTTTTTGGTCATCAATTTGCTTTTCTTTGTGATGGCAAATGGCTGCTTCACTTGTACACAGCCTAATCCAAAGCCTAACCCATTCCCTTTCCCAAACCCAACTCCTGCTACAAAGAGTTGTCCCAGAGATGCACTAAAGTTAGGTGAATGTGCTAAGATTCTTAATGGACCAATTGGTGCAGTTGTGGGGTCACCACCAGATCACCCATGTTGCTCGGTGTTAGAAGGACTCATTGATCTTGAAGTTGCACTTTGTCTCTGCACTGCCATTAAAGCTAACATACTTGGCATTAATCTTAACATTCCCATTTCACTTAGCTTGATCCTTAACGCCTGTGAGAAAACACCACCCTCTGACTTCCAATGTGCCTAG 405 0.4346 MDSSRSSTLGLFLVINLLFFVMANGCFTCTQPNPKPNPFPFPNPTPATKSCPRDALKLGECAKILNGPIGAVVGSPPDHPCCSVLEGLIDLEVALCLCTAIKANILGINLNIPISLSLILNACEKTPPSDFQCA* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1582 134 CDD HPS_like 48 133 IPR027923 -
Apr10g1582 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 53 133 IPR036312 -
Apr10g1582 134 PANTHER - 8 133 - -
Apr10g1582 134 Pfam Hydrophobic seed protein 51 134 IPR027923 -
Apr10g1582 134 Gene3D - 48 134 IPR036312 -
Apr10g1582 134 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 8 133 - -
Apr10g1582 134 SMART aai_6 51 133 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1582 Apr-Chr10 28381637 28382041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1582 42 133 Acyl Lipid Metabolism Gene Families AT4G22490 35.870 7.17e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1582 - - var:108336118 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1582 10 28381637 28382041 Apr10g1582 10 28381637 28382041 ECH