Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1581 ATGAGCACTCTTCAATATATCCCAGATGCATGGAACTACAAGGGTCGCCCAGCAGAGAGGTCCAGAACCGGTGGTTGGACTTCTGCTGCCATGATTTTAGGAGTAGAAGCATGTGAACGGTTAACGACAATGGGCATTGCCGTAAATTTGGTGACATATTTGACGGGTACCATGCATTTGGGCAATGCTTCCTCTGCCAACACAGTCACCAACTTCTTGGGAACCTCCTTTATGCTCTGTTTGCTGGGTGGTTTTGTAGCTGACACTTTTATTGGAAGATACCTCACTGTGGCCATCTTTGTAACCGTTCAAGCAACTGGTGTTACAATCTTGACAATATCAACAATAATTCCAAGCCTACATCCTCCAAAATGCACAAGAGATTGTGTACCTGCAAGCAACACGCAGCTAATGGTGCTTTATATAGCTCTTTATGTGACAGCACTTGGTATTGGTGGTCTGAAATCGAGTGTGTCAGGGTTTGGTTCCGATCAGTTCGATGATTCAGACAAAGGAGAGAAAAAGCAGATGATAAAATTCTTCAACTGGTTCTTCTTCTTCATAAGCATAGGGTCTCTAACCGCAGTGACGGTTCTTGTGTACATTCAAGATCACGTAGGCAGAGATTGGGGTTATGGGATATGTGTGGGTGCTATTTTGGTGGGTCTTCTAGTGTTCTTAACAGGGACTAGGAGGTACCGATTCAAGAAACTCGTGGGTAGCCCGTTAACTCAGATTGCGGTGGTGTTTGTGGCGGCTTGGAGGAAGAGACACTTGGAATTGCCTTCTGATTGTTCCTTGTTGTTCAACTTGGATGATATCGCTGATGAAACTCTCAAGAAGAAGAAGCAGATGCTGCCCCATAGCAAGCAGTTCCGGTTCTTGGACAAGGCAGCAATGAAGGACCCAAAAACAGAGGCAGTAGAAAGGAAATGGTATCTATCAACCTTAACAGACGTGGAAGAAGTTAAAATGGTGCTAAGAATGTTACCCATATGGGCAACCAGCATAATGTTTTGGAGCGTGTATGCCCAAATGACCACATTCTCAGTGTCACAAGCGGACACAATGAACCGCCACATCGGAAGCTCATTCCAAATCCCACCGGCATCTCTAACCGTCTTCTTCGTCGGAAGCATTCTCCTAACGGTGCCTATTTACGATCGTGTCATCACACCCATAGCAAGAAAAGTGCTCAACAACCCACAAGGACTAACCCCTTTACAACGCATTGGTGTTGGGTTGGTGTTCTCAATCCTTGCCATGGTGGCAGCAGCACTGACCGAAACAAAGCGGTTAAGGGTGGCACATTCACATGGTTTAACGGATAATCCAAATGCGGATCTTCCCATGAGTGTGTTCTGGTTGGTCCCACAATTCTTTTTTGTGGGGTCTGGGGAGGCCTTTACGTACATAGGACAGCTAGATTTTTTCCTCAGAGAATGTCCCAAAGGGATGAAAACGATGAGCACGGGCTTGTTTTTGAGCACACTGTCTTTGGGATTTTTCTTTAGCTCTTTATTGGTGACTTTAGTGCACAAAGTGACACGCCACCATAAGCCATGGCTCGCCGACAATCTTAACCAGGGGAAACTCTATTACTTCTACTGGCTCTTGGCTATGTTGAGTGGTTTGAATTTGGTTATATATTTATTTTGTGCTAGGTGGTACGTGTACAAGGATAAAAGGCTTGCTCAGGAGGGCATAGAATTGGAGGAACCCGACACTGCTTGTCATGCGTAG 1743 0.4555 MSTLQYIPDAWNYKGRPAERSRTGGWTSAAMILGVEACERLTTMGIAVNLVTYLTGTMHLGNASSANTVTNFLGTSFMLCLLGGFVADTFIGRYLTVAIFVTVQATGVTILTISTIIPSLHPPKCTRDCVPASNTQLMVLYIALYVTALGIGGLKSSVSGFGSDQFDDSDKGEKKQMIKFFNWFFFFISIGSLTAVTVLVYIQDHVGRDWGYGICVGAILVGLLVFLTGTRRYRFKKLVGSPLTQIAVVFVAAWRKRHLELPSDCSLLFNLDDIADETLKKKKQMLPHSKQFRFLDKAAMKDPKTEAVERKWYLSTLTDVEEVKMVLRMLPIWATSIMFWSVYAQMTTFSVSQADTMNRHIGSSFQIPPASLTVFFVGSILLTVPIYDRVITPIARKVLNNPQGLTPLQRIGVGLVFSILAMVAAALTETKRLRVAHSHGLTDNPNADLPMSVFWLVPQFFFVGSGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFFSSLLVTLVHKVTRHHKPWLADNLNQGKLYYFYWLLAMLSGLNLVIYLFCARWYVYKDKRLAQEGIELEEPDTACHA* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1581 580 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 83 107 IPR018456 GO:0006857|GO:0016020|GO:0022857
Apr10g1581 580 Gene3D MFS general substrate transporter like domains 2 567 IPR036259 -
Apr10g1581 580 SUPERFAMILY MFS general substrate transporter 15 562 IPR036259 -
Apr10g1581 580 Pfam POT family 94 522 IPR000109 GO:0016020|GO:0022857|GO:0055085
Apr10g1581 580 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 7 572 IPR000109 GO:0016020|GO:0022857|GO:0055085
Apr10g1581 580 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3-LIKE 7 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1581 Apr-Chr10 28368345 28372320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1581 9 573 Organic Solute Cotransporters AT1G12110 64.921 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1581 - - pvu:PHAVU_003G218500g 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1581 10 28368345 28372320 Apr10g1581 10 28368345 28372320 ECH
Apr7g0677 7 13580339 13586140 Apr10g1581 10 28368345 28372320 PCT