Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1522 ATGGGCTTCCCATCCAACGGCGCCTCGGCCGACAAGCCTCTCAACTTCCTCATATACGGCCGCACGGGCTGGATTGGGGGCCTCCTCGGCACCCTCTGCAAAGCCCAAGGGATCCAATTCCAATACGGCTCGGGCCGCCTCGAAAACCGTGCCTCGCTTGAAAACGACATAGCTGAGGTAAAGCCCACCCACGTGTTCAACGCCGCGGGAGTGACGGGCCGCCCCAACGTCGACTGGTGCGAATCCCACAAGGTTGAAACCATCCGAACCAACGTGGCTGGGACCCTCACACTCGCCGACGTGTGCCACGACAAGGGCCTCATCCTCATCAACTACGCCACTGGTTGCATCTTCGAGTACGATTCCGCTCACCCCCTCGGATCCGGAATCGGTTTCAAGGAAGAAGACTCTCCCAATTTCACCGGTTCCTTCTACTCCAAGACCAAAGCCATGGTAGAGGATCTGTTAAGGAACTACGATAATGTATGCACGTTGCGGGTTAGAATGCCTATTTCGTCTGATTTATCGAACCCGCGCAATTTCATCACAAAGATCACTCGATATGAGAAGGTTGTGGATATTCCGAATTCGATGACTATATTGGATGAACTTCTTCCTATCTCCATTGAGATGGCGAAGAGAAATCTGACTGGGATCTGGAACTTCACCAACCCTGGAGTGGTTAGTCACAATGAAATATTGGAGATGTATAGAGATTATGTTGACCCTAACTTCACTTGGAAGAACTTCACTCTTGAGGAACAGGCGAAGGTGATTGTTGCTCCCAGAAGCAACAATGAACTTGACGCCTCCAAATTGAAGGAGGAGTTTCCAGAACTGTTGTCTATCAAGGACTCGCTCGTTCAGTATGTCTTCAAGCCAAATCAGAAGGTCAAAGGTTAA 903 0.5083 MGFPSNGASADKPLNFLIYGRTGWIGGLLGTLCKAQGIQFQYGSGRLENRASLENDIAEVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADVCHDKGLILINYATGCIFEYDSAHPLGSGIGFKEEDSPNFTGSFYSKTKAMVEDLLRNYDNVCTLRVRMPISSDLSNPRNFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYVDPNFTWKNFTLEEQAKVIVAPRSNNELDASKLKEEFPELLSIKDSLVQYVFKPNQKVKG* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1522 300 Pfam RmlD substrate binding domain 16 187 IPR029903 -
Apr10g1522 300 Gene3D - 6 299 - -
Apr10g1522 300 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 6 296 - -
Apr10g1522 300 CDD dTDP_HR_like_SDR_e 15 287 - -
Apr10g1522 300 PANTHER BNAC05G13120D PROTEIN 6 296 - -
Apr10g1522 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 288 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1522 Apr-Chr10 27677220 27679197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1522 K12451 - gmx:100781643 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1522 10 27677220 27679197 Apr10g1522 10 27677220 27679197 ECH
Apr10g1522 10 27677220 27679197 Apr7g0628 7 12944318 12949102 PCT