Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1518 ATGGCTGTTTGGTGCTGGACGCTGCTTTTTCCTGCTCTTGCTGTTATTCTCTTCTCTCCTCTGCGTTGTGCTTCCCAAAAAGTTCCAAACTACAGATTTATGCACAATGCAACGACAGCAGCAAACATTTCACACTATGACTACATCGTAATAGGAGGAGGCACAGCAGGTTGCCCTTTAGCTGCGACTCTGTCCCAAAATTACAGCGTGTTGGTGTTGGAACGCGGTGGGTCACCCTATGGCAACCCCAACATCACAAACTTAGGAGCCTTTGGTGCTGCCCTCTCTGACACATCCCCTACCTCTCCCGCTCAGCGTTTCATCTCTCAAGACGGTGTCATCAACTCAAGAGCTCGAGTCCTTGGTGGCGGTAGTTGTTTGAACGCTGGCTTTTACACTCGTGCTAGCCCTCAATATGTCAGGGAAGCGGGTTGGGATGAAAGGACAGTGAAAGAATCATACGAATGGGTGGAGAAGAAGGTGGCGTTTGAGCCACAGGTGCAGCAGTGGCAATCAGCTGTGCGGGATGGATTGTTGGAGGTGGGAGTGGTACCCAACAATGGCTTCACTTATGATCATATTGATGGGACTAAGGTAGGGGGCACCATCTTTGACGAGCATGGTAACAGGCACACCGCTGCTGATCTTTTGGAATATGCCAACCCCACTGGAATCACTGTGCTTTTACATGCCACCGTGCATAGGATCTTGTTTAGAATGAAAGGTACTTCAAGGCCCATGGCCCATGGAGTGGTGTTCAGGGATGCATTGGGGCGTAGACACAAGGCGTACCTGAAGCCCGGGCCGAAGAACGAGATAATTGTTTCGGCGGGTGCACTTGGAAGCCCCCAACTTCTAATGTTGAGTGGAATTGGGGCAGCAGAGCAGCTTAAGAGGCATAACATAAGAATAACATTGGAGCAACCATTGGTAGGACAGGGAATGTCAGATAACCCAATGAACGCCATATTTGTGCCTTCTCCTGTACCCGTAGAGGTGTCGCTAATTGAGATTGTTGGCATCACCAATTTTGGGAGCTACATTGAAGCTGCCAGTGGTGAAAACTTTGCCGGTGGTTCCCCAAGAGACTACGGAATGTTCTCCCCCAAGATTGGTCAACTGTCCACGGTGCCCCCAAAGCAAAGGACAGCAGAAGCCCTGGCAAAGGCAACAGAAATGATGGAGAGTCTTGACGAAGCAGCCTTCAGAGGTGGATTCATCCTGGAGAAAATCATGGGTCCAATATCAACGGGTCATTTGGAGCTCCGAACCCGTGATCCAAATGATAACCCGTTGGTGACCTTCAACTACTTCCAAGATCCACGAGACTTAGAGAGATGCGTCAAAGGCCTTAGCACCGTGGAAAAGATAATAGAATCCAAGGCATTCTCTCCATTCAGATACCAGAACATGCCACTGTCCATGCTTTTGAACTTGACCGCAAGTTCCCCTGTTAACTTGTTGCCCAAACACATCAATTCCTCATTGTCTCTCCAGCAGTTCTGCAAAGACACTGTCATGACCATTTGGCATTACCATGGTGGCTGCCAAGTTGGCAAAGTCGTTGATAGAGACTATAAAGTTCTTGGTGTCGACGCTTTGCGTGTTATTGATGGTTCCACCTTTAACTACTCTCCCGGAACTAATCCTCAGGCCACTGTGATGATGCTTGGCAGGTATATGGGAGTCAAAATATTGAGTGAGAGACTTGGTGCAGCTGCTGATGAAACAGAAGCAGCTGTGTAG 1746 0.4903 MAVWCWTLLFPALAVILFSPLRCASQKVPNYRFMHNATTAANISHYDYIVIGGGTAGCPLAATLSQNYSVLVLERGGSPYGNPNITNLGAFGAALSDTSPTSPAQRFISQDGVINSRARVLGGGSCLNAGFYTRASPQYVREAGWDERTVKESYEWVEKKVAFEPQVQQWQSAVRDGLLEVGVVPNNGFTYDHIDGTKVGGTIFDEHGNRHTAADLLEYANPTGITVLLHATVHRILFRMKGTSRPMAHGVVFRDALGRRHKAYLKPGPKNEIIVSAGALGSPQLLMLSGIGAAEQLKRHNIRITLEQPLVGQGMSDNPMNAIFVPSPVPVEVSLIEIVGITNFGSYIEAASGENFAGGSPRDYGMFSPKIGQLSTVPPKQRTAEALAKATEMMESLDEAAFRGGFILEKIMGPISTGHLELRTRDPNDNPLVTFNYFQDPRDLERCVKGLSTVEKIIESKAFSPFRYQNMPLSMLLNLTASSPVNLLPKHINSSLSLQQFCKDTVMTIWHYHGGCQVGKVVDRDYKVLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILSERLGAAADETEAAV* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1518 581 PANTHER OSJNBA0019K04.7 PROTEIN 15 570 - -
Apr10g1518 581 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 515 - -
Apr10g1518 581 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
Apr10g1518 581 Coils Coil 380 400 - -
Apr10g1518 581 PIRSF Alcohol_oxidase 22 577 IPR012132 GO:0050660
Apr10g1518 581 Gene3D - 163 508 - -
Apr10g1518 581 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Apr10g1518 581 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
Apr10g1518 581 Gene3D - 46 558 IPR036188 -
Apr10g1518 581 SUPERFAMILY FAD/NAD(P)-binding domain 44 568 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1518 Apr-Chr10 27635688 27642718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1518 23 569 Miscellaneous Gene Families AT5G51950 60.108 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1518 - - gmx:100796752 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1518 10 27635688 27642718 Apr10g1518 10 27635688 27642718 ECH