Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1514 ATGCCCCAGTTACCCTCTAGCTCAACTTTCTCTGAAAGGAATGAGGGCCACCCAAATGTATGGAGAACCCAAGTACAGGAAGAGCCCAACATGTTCACCACTTTGATCCCAAAATCCCCAACAAGATGTCAACGTAACATCCATTTGTCTCTGGCCCTCAATGAAGCCAAGTGCATGGCGAACATATCATTCCCTATGATCTTAACCGGTCTTTTACTCTATTCTCGTTCCATGATCTCCATGCTCTTCCTGGGTCACCTCGGTGAACTCGCTCTCGCCGGTGGCTCTTTAGCCATTGGATTCGCCAACATCACTGGTTACTCTGTTCTCTCTGGCCTCGCCATGGGGATGGAACCCATCTGCGGCCAAGCCTTCGGTGCCAAAAGATTAAAACTTCTCGGCCTCACCGTGCAGAGAACCGTGCTTCTTCTTCTCCTAACTTCACTTTTCATCTCCTTCCTATGGCTCAACATGAAGAAACTATTGCTCTTGTGTGGTCAAGAACAGGATATCGCCAACGAAGCCCAATTCTATATACTCTATTCTCTCCCTGATCTCATAGCACAATCGCTGCTACACCCTTTGAGAATCTACCTTCGAACCCAATCAATAACCCTTCCACTCACATGCTGTGCCGCGCTCTCTATCGTTCTCCACGTTCCCATTAATTACCTCCTCGTGTCTGTTCTCAAGCTTGGAATCAAAGGTGTCGCTTTAAGCGCTGTTTGGACGAATTTCAACCTCGTGGGATCGTTGATTATCTACATCTTGCTTTCGGGAACACACAAGAAAACGTGGCCTAGTGTTTCTTGGGGATGCTTAAAGGGGTTTAAGACACTCATGAATCTCGCGATTCCGAGCTGCATTTCGGTTTGTCTCGAATGGTGGTGGTACGAGATCATGATTTTGCTTTGTGGGTTATTGGTTAATCCACATGCAAGTGTTGCATCAATGGGGGTTTTGATTCAAACGACGGCGTTGATATACATTTTTCCGTCTTCTTTGAGCTTTGGGGTGTCAACGAGGGTTGGGAACGAGTTGGGTGCAGGGAATCCCGAGAAAGCGAAGCTCGCGGCGATTGTGGGACTCTGTTTCAGCTTCGTTTTGGGGTTCTGTGCTTTGACGTTTGCCGTTTCCGTGAGAAAGGTTTGGGCTTGTATGTTCACGCAGGATGAAGAGATAATTGCGTTGACGTGTATGGTGTTACCGATTATTGGGCTTTGTGAATTAGGGAACTGTCCACAAACGACGGTTTGTGGCGTTCTGAGGGGAACGGCAAGACCCAAATTGGGAGCAAACATAAACTTGGTGTGTTTCTATCTGGTGGGAATGCCAGTTGCAGTATGGTTGGGTTTCTTTGCGGGATTTGACTTCAAAGGGTTGTGGGTGGGTTTGTTGGCAGCGCAAGGGTCTTGTATGATGACAATGATGCTGGTGTTGGCACGGACAAATTGGGATGGTCAAGCACAAAGAGCCAAGGATCTCACATCATCTGATCCTAGTGAAGACTATAAAGTAGAGGATCATGAAGAGGAACTCAAATACGAGCAAAATGACAAGTGCTTTTTGGGTTCATGTGCCACCAAAGATGCCTCTCATTTTCTTGTTTGA 1611 0.4711 MPQLPSSSTFSERNEGHPNVWRTQVQEEPNMFTTLIPKSPTRCQRNIHLSLALNEAKCMANISFPMILTGLLLYSRSMISMLFLGHLGELALAGGSLAIGFANITGYSVLSGLAMGMEPICGQAFGAKRLKLLGLTVQRTVLLLLLTSLFISFLWLNMKKLLLLCGQEQDIANEAQFYILYSLPDLIAQSLLHPLRIYLRTQSITLPLTCCAALSIVLHVPINYLLVSVLKLGIKGVALSAVWTNFNLVGSLIIYILLSGTHKKTWPSVSWGCLKGFKTLMNLAIPSCISVCLEWWWYEIMILLCGLLVNPHASVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAGNPEKAKLAAIVGLCFSFVLGFCALTFAVSVRKVWACMFTQDEEIIALTCMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLVCFYLVGMPVAVWLGFFAGFDFKGLWVGLLAAQGSCMMTMMLVLARTNWDGQAQRAKDLTSSDPSEDYKVEDHEEELKYEQNDKCFLGSCATKDASHFLV* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1514 536 PANTHER PROTEIN DETOXIFICATION 36 508 - -
Apr10g1514 536 PANTHER MULTIDRUG RESISTANCE PROTEIN 36 508 - -
Apr10g1514 536 TIGRFAM matE: MATE efflux family protein 65 462 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr10g1514 536 Pfam MatE 65 225 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr10g1514 536 Pfam MatE 286 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr10g1514 536 MobiDBLite consensus disorder prediction 1 20 - -
Apr10g1514 536 CDD MATE_eukaryotic 55 491 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1514 Apr-Chr10 27588296 27589906 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1514 K03327 - gmx:100778250 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1514 10 27588296 27589906 Apr10g1514 10 27588296 27589906 ECH
Apr10g1514 10 27588296 27589906 Apr7g0616 7 12807768 12811112 PCT