Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1452 ATGGCTTCTTCGGAAGCCGATTCCCGTCTGAATCAGGTCGTGGTTCCCGCACTCGAGAAGATCATCAAGAACGCTTCATGGCGAAAGCACGCGAAGCTCGCTCACGAGTGCAAATCCGTCATCGAGAGGCTCACTCACCAGCAGTTACCTCCTGGTTCTCCCACCGATACCGAACCGGAAAACACGGTTCCCGGTCCGCTCCACGACGGCGGTCCGGTTGAGTTCTCGCTCGCCGAGTCCGAATCGATCCTCAGTCCTCTCATCAATGCCGCCAGTTCTGGCGTCCTTAAGATCGCGGATCCCGCCGTCGACGCGATCCAGAAGCTCATCGCGCACGGCTACCTCCGCGGCGAGGTGGACCCCGGCGGTGCCGCGGCGGAGGCGAAACTGCTATCGAGTATGATCGAATCGGTTTGCAAATGCCACGATTTAGGCGACGAGGCGATGGAGTTGCTGGTGCTGAAGACGCTCTTGTCTGCGGTAACATCAATTTCGCTGCGAATTCATGGTGATTGCTTGCTTCTCATTGTAAGAACGTGCTATGATATATATCTGGTGAGTAAGAATGTAGTTAATCAGACGACTGCGAAAGCGTCGTTGATTCAGATGTTGGTGATTGTGTTTAGGAGAATGGAGGCAGATTCGTCCACGGTTCCGATTCAGCCTATTGTGGTGGCTGAATTGATGGAGCCAGTGGAAAAATCTGATGTGGATAATTCAATGACGCAATTTGTGCAAGGGTTTATTACGAAGATAATGCAGGACATTGATGGGGTTTTGAATCCTGTGACGCCGAGTGGGAAGGTTTCTCTGTTAGGTGGTCATGACGGTGCGTTTGAGACCACTACGGTGGAGACGACGAATCCCACGGATTTGTTGGATTCCACTGATAAGGACATGTTGGATGCCAAGTATTGGGAGATTAGTATGTATAAGACGGCATTGGAGGGCAGGAAGGAGGAGCTGGTGGATGGGGAGTTGATTGAGAGGGATGATGATTTGGAGGTTCAGATTGGGAACAAGTTGAGAAGAGATGCTTTCTTGGTGTTTAGGGCGCTCTGTAAATTGTCTATGAAGACGCCCCCTAAGGAGGCGTCTGCGGATCCGCAGTTGATGAAGGGGAAGATTGTGGCTCTTGAGTTGTTGAAGATTTTGCTGGAGAATGCTGGTGCTGTATTCAGGACTAGTGAAAGGTTTCTAGGTGCCATCAAGCAGTACTTATGTTTATCGTTGTTGAAGAACAGTGCTTCAACTCTTTTGATTGTATTTCAGCTGTCATGTTCCATCTTCATCAGTCTGGTATCACGGTTTAGAGCTGGATTGAAAGCAGAAATTGGTGTTTTTTTCCCTATGATTGTTCTCAGGGTCCTAGAAAATGTTTCTCAACCGAATTTTCAGCAGAAGATTATAGTGCTTCGATTTCTTGAGAAGCTTTGTGTTGATTCACAAATACTGGTTGACATATTTATCAACTATGACTGTGATGTCAATTCATCAAACATATTTGAGAGGATGGTCAATGGACTTCTGAAAACTGCTCAAGGTGTCCCTCCTGGTGTAACAACCACACTTTTGCCACCTCAAGAAGTAACACTAAAGCTTGAAGCCATGAAGAGCTTGGTTGCTGTTCTAAAATCAATGGGAGATTGGATGAACAAACAATTGCGCATTCCTGATCCTCATTCATCCAAGAAAATTGAAGCAACTGATAATAGCCTTGAAACTGGCAGTTTTGCCATGGTAAATGGGAATGGAGAAGACCCAGGGGAAGGATCTGAGTCTCCTTCTGAAGCCTCCAATGACGCATCTGATGTTTCAACTATTGAGCAACGCCGGGCTTATAAACTGGAACTCCAGGAAGGTATATCACTTTTTAATAGGAAGCCTAAGAAAGGAATTGAGTTCCTCATCAATGCCAACAAAGTGGGTGATTCACCAGAGGATATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTATCTGGGAGAGAGGGAAGAGTTATCCTTGAAGGTAATGCATGCTTACGTGGATTCCTTTAACTTTCAAGGCATGGAGTTTGATGAGGCAATCAGGGTTTTTCTTCAAGGATTTAGACTACCTGGTGAGGCACAGAAAATTGATCGGATCATGGAAAAGTTTGCTGAACGTTATTGCAAATGTAATCCAAAGGCCTTTTCTAGTGCTGACACAGCATATGTCCTTGCCTATTCTGTTATAATGCTCAATACAGATGCTCACAATCCTATGGTGAAGAACAAGATGTCTGCTGATGATTTCATAAGAAACAATCGTGGGATTGATGATGGAAAAGATCTGCCTGAGGAATACTTGAGGTCCTTGTTTGAGAGAATATCTAGAAATGAGATCAAAATGAAAGAAAGTGATGTGACTCCACAACAAAAACAGGCTGTGAACCCTAATAGACTTTTAGGCTTGGATAGTATATTGAATATTGTGATCCGTAAGCGTGGGGAAGAGAGTATGGAGACCAGTGACGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAAAACTGAGTCAGTCTATTACGCAGCCACAGATGTTGTAATCCTCAGATTCATGGTTGAGGTGTGTTGGGCACCAATGTTAGCTGCCTTCAGCGTTCCTCTTGATCAAAGTGATGATGAGACTGTAATATCTCTGTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACTTCCGCAATGTCCATGAAGACTCATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACATCACTACATTCACCAGCAGATATTAAGCAGAAAAATGTAGATGCAATTAAGGCAATAGTTGCTATTGCTGATGAGGATGGAAATTACTTACAAGAAGCTTGGGAGCATATCTTGACTTGTGTTTCTCGGTTTGAGCATCTACACCTTCTTGGAGAGGGTGCTCCACCAGATGCCACATTCTTTGCCTTTCCTCAGAATGATTCAGAAAAAACAAAGCAAGCAAAGTCAACCATTCTTCCTGTTTTGAAGAAGAAGGGACATGGGAGGATGCAGTATGCAGCTGCTACACTGATGCGCGGTTCATATGATAGTGCTGGCATTGGCAGTAATGTTTCTGGAGCAGTCACGTCAGAACAGGTGAACCATATAGTGTCTAATTTAAATATGCTGGAACAAGTAGGAAGCTCTGAAATGAACCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTTAAGGCTTTATGCAAGGTCTCCATGGAGGAACTGAGGTCTCCATCTGATCCACGTGTTTTCAGCCTTACAAAGATTGTTGAGATTGCGCACTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGCATCTGGCATGTACTCTCTGATTTCTTTGTAACTATTGGCTGTTCCCCAAACCTTTCAATTGCAATTTTTGCTATGGATTCCTTGCGTCAGTTGTCAATGAAGTTTCTGGAGCGGGAAGAATTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGAAAGAGTAGTGCTGTTGAAATTAGAGAACTAATTATCAGATGTGTCTCTCAAATGGTTCTATCTCGTGTCAACAATGTCAAATCAGGATGGAAAAGCATGTTCATGGTGTTCACAACAGCAGCTTATGATGACCACAAAAACATTGTACTCCTGGCTTTTGAAATTATTGAGAAGATTATTCGAGATTACTTTCCATACATCACTGAGACTGAAACCACAACCTTCACAGATTGTGTGAATTGTCTAATTGCATTCACTAATAGTAGATTTAATCAAGAGATTAGCCTAAATGCCATAGCTTTTCTTCGGTTTTGTGCAACAAAACTAGCAGAAGGAGACCTTGGCTCATCAGCAAGGAATAAGGATAAGGAAGTTTCTGGAAAGATTCCCTCACCTTCACCTCGAACAGGAAAAGAGGGGAAACAAGATAACGGAGAGGTGACTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCAGGTCTTTCTGAGCTTAGCTTTGACCCAAGGCCAGAGATTAGGAAGAGTGCCTTGGAAATCTTGTTTGAAACCTTGCGTAACCACGGCCATCTCTTTTCACTGCCTTTATGGGAAAGAGTATTTGAGTCTGTCCTATTTCCAATATTTGATTATGTTCGACATGCTATTGATCCTTCAGGGAGTAGTACCCCAGTCAATGAAGTAGAGACTGATGGTGAGCTTGATCAGGATGCTTGGCTGTATGAGACATGCACCTTGGCCCTCCAATTGGTTGTAGATCTTTTTGTCAACTTTTACAACACAGTCAATCCACTTTTAAGAAAAGTGCTGATGCTCCTGGTTAGCTTTATAAAGCGCCCTCATCAAAGCCTTGCTGGAATTGGTATTGCTGCATTTGTTCGTTTGATGAGTAATGCTGGGGAGCTATTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTCTCACTAAAAGAAGCAGCAAATGCAACACTCCCTAACTTTACGTTTCTTGAAAATGAAGACTTTACTAGGAATCATGAACGTGCTTCAACAGCTGAAGATGATAGAGATCTTGCTGAGTCTGGCTCCCCAGGCTCCCCAGATAATGTTGAAAGCCTGAGGATTCGCCGTCTTTATGCTTATTTAACTGATGCAAAATGCCGAGCTGCTGTTCAGCTTTTATTGATTCAGGCGGTGATGGAGATCTATAACATGTATCGTTCTCACCTTTCAGCAAAAACCATGCTAGTCCTGTTTGATGCTTTGCACGATGTAGCGTTTCATGCACACAAGATTAACAGTGATTCTGCATTACGTTCAAAGCTTCAAGAGTTTGGTTCTATGACCCAAATGCAAGACCCTCCCCTGTTACGCCTTGAGAATGAGTCATACCAGATCTGCCTTACATTTTTACAGAACCTTGTTGTTGACAAGCCTCCTAGTTATGAAGCAGACGAGGTTGAATCCTATCTTGTTCGCCTTTGTCAGGAGGTTCTGGAGCTTTATATTGAAGTTGCAGGTTTTGGACAAAAATCTGAATCTTCTCATGGTAGAAAGCCCCAGTGGTTAATTCCTTTAGGCTCTGGGAAGAGGAGAGAATTGGCTGCACGGTCACCTCTCGTTGTCGCTACTCTGCACTCCATTTGTAGTTTGGGCGATGTCTCTTTTGAAAAGAACCTGTCTCATTTTTTCCCTCTTCTTTCTAGCTTGGTAAGTTGTGAACATGGGTCCAACGAGGTCCAGGTTGCGCTTAGTGATATGCTTAGTTTATCAGTTGGTCCTGTTTTGCTACAGTCATGTTGA 5352 0.4342 MASSEADSRLNQVVVPALEKIIKNASWRKHAKLAHECKSVIERLTHQQLPPGSPTDTEPENTVPGPLHDGGPVEFSLAESESILSPLINAASSGVLKIADPAVDAIQKLIAHGYLRGEVDPGGAAAEAKLLSSMIESVCKCHDLGDEAMELLVLKTLLSAVTSISLRIHGDCLLLIVRTCYDIYLVSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMEPVEKSDVDNSMTQFVQGFITKIMQDIDGVLNPVTPSGKVSLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKEELVDGELIERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEASADPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKIIVLRFLEKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEVTLKLEAMKSLVAVLKSMGDWMNKQLRIPDPHSSKKIEATDNSLETGSFAMVNGNGEDPGEGSESPSEASNDASDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGDSPEDIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFNFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKESDVTPQQKQAVNPNRLLGLDSILNIVIRKRGEESMETSDDLIRHMQEQFKEKARKTESVYYAATDVVILRFMVEVCWAPMLAAFSVPLDQSDDETVISLCLEGFRYAIHVTSAMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKAIVAIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKQAKSTILPVLKKKGHGRMQYAAATLMRGSYDSAGIGSNVSGAVTSEQVNHIVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSPNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNQEISLNAIAFLRFCATKLAEGDLGSSARNKDKEVSGKIPSPSPRTGKEGKQDNGEVTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALEILFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGSSTPVNEVETDGELDQDAWLYETCTLALQLVVDLFVNFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVFSLKEAANATLPNFTFLENEDFTRNHERASTAEDDRDLAESGSPGSPDNVESLRIRRLYAYLTDAKCRAAVQLLLIQAVMEIYNMYRSHLSAKTMLVLFDALHDVAFHAHKINSDSALRSKLQEFGSMTQMQDPPLLRLENESYQICLTFLQNLVVDKPPSYEADEVESYLVRLCQEVLELYIEVAGFGQKSESSHGRKPQWLIPLGSGKRRELAARSPLVVATLHSICSLGDVSFEKNLSHFFPLLSSLVSCEHGSNEVQVALSDMLSLSVGPVLLQSC* 1784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1452 1783 SUPERFAMILY Sec7 domain 611 804 IPR035999 GO:0005085|GO:0032012
Apr10g1452 1783 Gene3D - 607 688 - -
Apr10g1452 1783 ProSiteProfiles SEC7 domain profile. 607 794 IPR000904 GO:0005085|GO:0032012
Apr10g1452 1783 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 8 1776 - -
Apr10g1452 1783 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 8 1776 - -
Apr10g1452 1783 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 214 IPR032629 -
Apr10g1452 1783 MobiDBLite consensus disorder prediction 46 71 - -
Apr10g1452 1783 Gene3D - 689 809 IPR023394 -
Apr10g1452 1783 Pfam BIG2 C-terminal domain 1574 1772 IPR046455 -
Apr10g1452 1783 Pfam Sec7 domain 615 796 IPR000904 GO:0005085|GO:0032012
Apr10g1452 1783 CDD Sec7 614 796 IPR000904 GO:0005085|GO:0032012
Apr10g1452 1783 Pfam C-terminal region of Mon2 protein 1345 1406 IPR032817 -
Apr10g1452 1783 MobiDBLite consensus disorder prediction 576 606 - -
Apr10g1452 1783 MobiDBLite consensus disorder prediction 1531 1550 - -
Apr10g1452 1783 SUPERFAMILY ARM repeat 378 1510 IPR016024 -
Apr10g1452 1783 Pfam Domain of unknown function (DUF1981) 1164 1246 IPR015403 -
Apr10g1452 1783 MobiDBLite consensus disorder prediction 1305 1335 - -
Apr10g1452 1783 SMART sec7_5 611 796 IPR000904 GO:0005085|GO:0032012
Apr10g1452 1783 MobiDBLite consensus disorder prediction 46 60 - -
Apr10g1452 1783 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 343 501 IPR032691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1452 Apr-Chr10 26917270 26929428 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1452 K18442 - gmx:100798955 3207.54