Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1448 ATGGCATATTTTCTCTCCGTTACCCTGTCCTCTGTTTCATTTTCCGGAGCTTCAATCGGGTCAGATCATAGTCTAAGTTTCAATTCGGGTCAATTAAGGTCTTCAAACATGGTCGCTCACTATGGCAGTAGTAGCATCTTGTTCAGAGGACCTCGTTTACCCTTTTTCCGCTCCATAGCCAGCAATCGCAACAAGAGGAACACATGCTGGAAACCTCCGCGAGCAGCTGCAATGAATGATTTTTGGATCCCTATGAGCAGCTCAGCTGTAAAAAATAGGGCATGGACTGAAAACATAAGGAGTGTGAGATTGATAACTGCAGTTAAAACTCCATACCTACCTAATGGGCAATTTGATCTTGATGCATATGACAACTTGGTAGATATGCAGATTGCAAATGGGGTTGAAGGTATTCTTGTTGCTGGCACAACTGGTGAAGGGCAATTAATGACCTGGGATGAACAGATAATGCTTATTGCACACACAGTCAACTGTTTTGGTGATAAAGTTAAGGTTGTTGGTAATGGCGGAAGCAACTGCACATCAGAGGCAATTAAGGCTACTGAGCGTGGTTTTGCGGTTGGAATGAATGCTGCACTTCATATAAACCCCTATTACGGAAAAACCTCCTTGGATGGTTTGCTTGCTCACTATAATAGTGTGCTTTCTATAGGTCCTGTCATCATATATAACATACCTACAAGGACTAATCAAGATATTCCTCCTAGTGTAGTTCAAACCTTGGCTCAAAGTCCTAATTTGGTTGGTGTGAAGGAGTGTGTGGGAACTGAGAGGATTAAACAGTATACAGATCAAGGAATTGTTGTGTGGACTGGGATTGATAAAATAAGCCATGATGCTAGATGGGATTTTGGGGGTATTGGGGTTCAATCTGTTGCTAGCAACTTGATTCCTGGTTTAATGAGAGAACTCATGTTTGGAGGCAAGAATCCTACATTGAATTCAAAAATCATGCCTTTGTTTGATTGGCTTTCCCAAGAGCCACTTCCAATTGCTTTGAACACAGCTCTTGCTCAACTTGGGGTCATCAAGCCAGTTTTCAGGCTACCCCATGTACCTCTGCATGTGGAACAAAGGAAAGAGTTTGTCAATTTGGTGAAGCAAATGGGGCGAGAGCATTTTGTTGGAGAAAAAGATGTTCAAGTTCTTGATGACGATGACTTTGTCATAGTTGGTCGATATTAA 1206 0.4212 MAYFLSVTLSSVSFSGASIGSDHSLSFNSGQLRSSNMVAHYGSSSILFRGPRLPFFRSIASNRNKRNTCWKPPRAAAMNDFWIPMSSSAVKNRAWTENIRSVRLITAVKTPYLPNGQFDLDAYDNLVDMQIANGVEGILVAGTTGEGQLMTWDEQIMLIAHTVNCFGDKVKVVGNGGSNCTSEAIKATERGFAVGMNAALHINPYYGKTSLDGLLAHYNSVLSIGPVIIYNIPTRTNQDIPPSVVQTLAQSPNLVGVKECVGTERIKQYTDQGIVVWTGIDKISHDARWDFGGIGVQSVASNLIPGLMRELMFGGKNPTLNSKIMPLFDWLSQEPLPIALNTALAQLGVIKPVFRLPHVPLHVEQRKEFVNLVKQMGREHFVGEKDVQVLDDDDFVIVGRY* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1448 401 ProSitePatterns Dihydrodipicolinate synthase signature 2. 230 260 IPR020625 GO:0016829
Apr10g1448 401 Gene3D Aldolase class I 96 401 IPR013785 -
Apr10g1448 401 SUPERFAMILY Aldolase 104 376 - -
Apr10g1448 401 PRINTS Dihydrodipicolinate synthase signature 134 155 IPR002220 GO:0016829
Apr10g1448 401 PRINTS Dihydrodipicolinate synthase signature 170 188 IPR002220 GO:0016829
Apr10g1448 401 PRINTS Dihydrodipicolinate synthase signature 202 218 IPR002220 GO:0016829
Apr10g1448 401 PRINTS Dihydrodipicolinate synthase signature 225 242 IPR002220 GO:0016829
Apr10g1448 401 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE 42 401 - -
Apr10g1448 401 CDD DHDPS 103 373 IPR005263 GO:0008840|GO:0009089
Apr10g1448 401 PANTHER DIHYDRODIPICOLINATE SYNTHASE 42 401 IPR002220 GO:0016829
Apr10g1448 401 Pfam Dihydrodipicolinate synthetase family 103 375 IPR002220 GO:0016829
Apr10g1448 401 ProSitePatterns Dihydrodipicolinate synthase signature 1. 137 154 IPR020624 GO:0016829
Apr10g1448 401 SMART DHDPS_2 100 377 IPR002220 GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1448 Apr-Chr10 26859923 26862539 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1448 K01714 - gmx:100806626 623.239