Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1434 ATGAACGATAACGATGAACGCAGAGAAGGAGAGAGAGACACTCCGTATTGTTGCGTTTCCCACGAATTCGTCCGAATCGCGTTTGCAAACCCTAACAAAATCGCAGTGGTTCATGCTTCAGGCGTCGCTCACCTTTCCAGAGAGTTTTGCCGCCAAAATCCTTCCTCGCCCAACTTCAATGCAGACATTACCACGCTCTTAGAAAAGCGCGTTGAATCCACGTCACCGCCACTTTACCATGGGGACCGTTCCTTCACTTATTCTCATCTCTTGAACGCTGTTAGTTCCCTCAGCTTCCGCCTCCGCTCTATCCTGCTTGGTGCGGATGACCCCCACTTGATCACAGCCCAACCTCAAGGTAATGATGGTGTCGACTGTGAAGAGGAAATACAGACACCTGAATCCTTGGAAACTGTCATGCCTAGTGAAGAGGCATTGATTGAATCGAGCGAAGAGTATAGGCCAAAGATAGTGGGAATTTATATGCCTCCTTCTGTTGAATATATTGTTACTGTTCTTTCAGTACTGAGGTGTGGGGAAGCCTTCCTACCTCTGGACCCGTTTTGGCCAAACGAAAGGATATTGTCAGTTGCTTCTTCTTCAAATGTTGATCTCATTATAGGGTCCCAATCCTCATTTGGTAAAAGTGATTTGGACAAGCTTGATCTATCGCATTGGCTGCTAAAGTCAGTTAATTGTCCTGTTTTGAACTACTCCATTGAAGAGAACCGTCAAGAATGTAGCTATCCAGCAGATTTGGCATGGCCTTGTGCCAGTGAAAAGGAGAGATCATTTTGTTATCTGATGTACACTTCTGGATCAACTGGAAAGCCTAAAGGAGTGTGTGGCACTGAACAAGGTCTTTCAAATCGCTTTTTATGGATGCAAGGAATGTATCCTTTAAGTGGGCAGGAACTACTGTTGTTTAAGACGTCAATTAGCTTCATTGACCACCTGCAAGAATTTCTCAGTGCTATTCTGACTGCTTGTGTGCTAGTTATTCCTCCTCCCAATGAGCTAAAAGAAAATATATATTCTATCATAGATTTTCTGCAGGCATATTTTGTTAATAGGCTTACGGCTGTTCCATCACTAATGAGGACCATTCTTCCTGGATTGCAAACCCATGCTAACATGCGAGTTGGAAGTTCACTGAAATTGCTTGTGCTTAGTGGTGAAACTTTTCCTTTGACCTTGTGGGAGATGATTTCAACTATCTTACCAAAGACCTCCATCTTGAATTTATATGGAAGTACTGAGGTCTCTGGTGACTGTATATATTTTGATTGCAAGAGGATACCGTTGATTTTGAAGGAAGAAATGCTAACCAGTGTTCCAATAGGTTTACCCATTACTAACTGTGAAGTGATACTTCTTGGAAAAAATGGTTCATCGAATGAGGGAGAGCTATATGTTGGTGGTTCTTGCATCTCTAGAGGTTACTATAACGAATCTAATACAATATCTGATGCATTTGTAAAATTGCCTCGGAGTTACAGTTGTGATGATTCTCTTAATGCTAGCCAAAGCCAATTATACTTTGTAACGGGTGATTTAGTCAGACAGTTGCCAAGTGGTGACTTTGTATTTTTTGGAAGAAAAGACCGCATTATAAAAGTCAATGGACAGCGTATTGCCTTAGAAGAAGTTGAAAACTTGCTAAGGGAACATCCATATATAAATGATGCCGCTGTAATTTGTCAAAATAATCAAGCAGAACTTGTGTTTCTTGAAGCCTTTATTATATTAAGGGACAAGGAAAGACTGGGTGAGTTATTAATACCTGCAATCAGAAGTTGGATGATTAACAAACTTCCTTCAGTTGTGCTTCCCAACCGTTTCATCTTTATGGAATCATTTCCTGCATTTCCTAGTGGTAAGATTAATTATGAGTTGTTGGTTGGCTCAGCATTATTGACAAAGAATGCCAAGGATAAGGTTGGTAGCATCGATTGCAGCAATCTTCTCCGACTTATTAAAAAGGCCTTTCATGATGCTTTAATGGTTGAAAGGATTTGCAATGATGATGATTTCTTTATGATGGGTGGTAACTCTCTTTCTGCTGCACATGTTGCTCATAGTTTGGGGATTGACTTGAGATTTCTTTACTATTATCCAAGTCCTTTTAAGCTTTGTATGGCTCTTCTCCAAAAAAGAGGATCATGCTCTTTGCATAACAGGCTGGACAATTGCTTGCAAATAAACAGAGACAGTCAAGATAAGCATGTTTCTACCAATCATGCTGAAAATTCTAGTCCTCTTCAGTCAAGAATAATTTCTGAAGATAATGATGACAATTCTTTTCCTTCCAAACGCTTAAAGATGGGTTCTTCTTCTACGGATGTTGCATCACAAGGTGATGAATTGTTCTCATGGTATTCCCCTTATCTATTATCATCCTCATTTAGCCGATGCAACAAGGTTTTGCATAAAGGGAAGCTGGCAGTAATTGATACACACCAAACAACTTGGTCTGCAAATGTTCCAAGAGGTAGCAGAGGTCATATAAAAGATTGTTGGAAAGTTTGCATGGAATCTTGTGTTGATGCTTCACCAATGCTTGTGTTTAAAGGCGTAGACATTTATTTGTTCATTGGATCTCACTCACATAAATTTCTCTGCTTAAATGCTAGAAGTGGTTCTGTCCAGTGGGAGATCAAACTAGAAGGACGTATTGAATGTACTGCAGCAATTGTTTCTGATTTTTCCCAGGTTGTTGTTGGATGTTACATGGGAAAAATATATTTTCTTGATTTTTTGAATGGCAACATCTGTTGGATTTTCCAAACATCTGGTGAGGTAAAATCACAGCCAGTTGTAGACACATTCAGACAGTTGATCTGGTGTGGCTCACATGATCATAACTTGTATGCTCTTGACTACAAAAAACATTGCTGTGTCTACAAGCTACCATGTGGAGGCAGTATATATGGGTCACCTGCCATTGATGAGGTTCGTGGCTTGCTTTATGTAGCCGCTACTGGTGGTCGTATAACAGCTATATCAATATCGACTTCTCCGTTTACTATATTGTGGCTACATGAATTAGAAGTCCCTGTGTTTGGTTCTCTTGCCGCCACCCCTAGTGGAACTGTAATATGTTGCTTGGTAGATGGCCATGTTCTTGCATTCGATCCAAATGGATCCTTAGTTTGGAAGAAAACAACTGATGGTCCAATATTTGCTGGGCCATGCATACCTTCTGTTCTTCCTCATGAGGAGGAGGGAGATCTACTGTGGCAATACAATGTTGGAGATCCAATTACTGCATCTGCTTATGTTGACGAGCATTTGCAGCTTAAATCTGATGCCTCCCATTCTTCAGACAGGTTAATTTGCATTTGTTCCAGTTCTGGAGGCATACACCTCCTTCGAGTGGACATGAATTTGTCTGAAGAAGCAAATCAACAAACACGCTATGTGCAAGAGTTTGCAAGGCTAAACTTGCCAGGGGATATATTCTCTTCGCCTTTAATGATTGGTGGCCGGATTTTTGTTGGTTGCCGGGATGATTATTTGCACTGTATTGCCCTTGAAATTTCAAAGCAACATGAAAGTTAA 3561 0.4072 MNDNDERREGERDTPYCCVSHEFVRIAFANPNKIAVVHASGVAHLSREFCRQNPSSPNFNADITTLLEKRVESTSPPLYHGDRSFTYSHLLNAVSSLSFRLRSILLGADDPHLITAQPQGNDGVDCEEEIQTPESLETVMPSEEALIESSEEYRPKIVGIYMPPSVEYIVTVLSVLRCGEAFLPLDPFWPNERILSVASSSNVDLIIGSQSSFGKSDLDKLDLSHWLLKSVNCPVLNYSIEENRQECSYPADLAWPCASEKERSFCYLMYTSGSTGKPKGVCGTEQGLSNRFLWMQGMYPLSGQELLLFKTSISFIDHLQEFLSAILTACVLVIPPPNELKENIYSIIDFLQAYFVNRLTAVPSLMRTILPGLQTHANMRVGSSLKLLVLSGETFPLTLWEMISTILPKTSILNLYGSTEVSGDCIYFDCKRIPLILKEEMLTSVPIGLPITNCEVILLGKNGSSNEGELYVGGSCISRGYYNESNTISDAFVKLPRSYSCDDSLNASQSQLYFVTGDLVRQLPSGDFVFFGRKDRIIKVNGQRIALEEVENLLREHPYINDAAVICQNNQAELVFLEAFIILRDKERLGELLIPAIRSWMINKLPSVVLPNRFIFMESFPAFPSGKINYELLVGSALLTKNAKDKVGSIDCSNLLRLIKKAFHDALMVERICNDDDFFMMGGNSLSAAHVAHSLGIDLRFLYYYPSPFKLCMALLQKRGSCSLHNRLDNCLQINRDSQDKHVSTNHAENSSPLQSRIISEDNDDNSFPSKRLKMGSSSTDVASQGDELFSWYSPYLLSSSFSRCNKVLHKGKLAVIDTHQTTWSANVPRGSRGHIKDCWKVCMESCVDASPMLVFKGVDIYLFIGSHSHKFLCLNARSGSVQWEIKLEGRIECTAAIVSDFSQVVVGCYMGKIYFLDFLNGNICWIFQTSGEVKSQPVVDTFRQLIWCGSHDHNLYALDYKKHCCVYKLPCGGSIYGSPAIDEVRGLLYVAATGGRITAISISTSPFTILWLHELEVPVFGSLAATPSGTVICCLVDGHVLAFDPNGSLVWKKTTDGPIFAGPCIPSVLPHEEEGDLLWQYNVGDPITASAYVDEHLQLKSDASHSSDRLICICSSSGGIHLLRVDMNLSEEANQQTRYVQEFARLNLPGDIFSSPLMIGGRIFVGCRDDYLHCIALEISKQHES* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1434 1186 Gene3D - 858 963 - -
Apr10g1434 1186 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 850 1176 IPR011047 -
Apr10g1434 1186 ProSitePatterns Putative AMP-binding domain signature. 268 279 IPR020845 -
Apr10g1434 1186 ProSitePatterns Phosphopantetheine attachment site. 680 695 IPR006162 -
Apr10g1434 1186 Gene3D - 653 715 IPR036736 -
Apr10g1434 1186 MobiDBLite consensus disorder prediction 745 762 - -
Apr10g1434 1186 MobiDBLite consensus disorder prediction 742 762 - -
Apr10g1434 1186 Gene3D - 535 643 IPR045851 -
Apr10g1434 1186 Pfam AMP-binding enzyme 157 540 IPR000873 -
Apr10g1434 1186 SMART ire1_9 852 887 IPR018391 -
Apr10g1434 1186 SMART ire1_9 1025 1055 IPR018391 -
Apr10g1434 1186 SMART ire1_9 896 929 IPR018391 -
Apr10g1434 1186 CDD A_NRPS 154 633 - -
Apr10g1434 1186 Gene3D - 1072 1180 IPR015943 GO:0005515
Apr10g1434 1186 Gene3D - 973 1069 IPR015943 GO:0005515
Apr10g1434 1186 Pfam PQQ-like domain 922 960 IPR002372 -
Apr10g1434 1186 Pfam PQQ-like domain 971 1004 IPR002372 -
Apr10g1434 1186 Pfam AMP-binding enzyme C-terminal domain 549 627 IPR025110 -
Apr10g1434 1186 Gene3D - 123 534 IPR042099 -
Apr10g1434 1186 SUPERFAMILY Acetyl-CoA synthetase-like 74 634 - -
Apr10g1434 1186 PANTHER EBONY 11 1180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1434 Apr-Chr10 26683457 26696249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1434 267 633 Acyl Lipid Metabolism Gene Families AT5G36880 22.102 6.46e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1434 K00142 - gmx:100820175 2015.35