Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1432 ATGGGTTTGATTTCTGGGATTTTTCTGGGGATGGTATTCGGCATCGCATTGATGGCAGGATGGGAGCGCATGATGAGGTACCGAAGCGCCAAGCGAATTGCAAAGGCAGTTGACATTAAACTCCTTGGATCGCTTAACAGAGATGATTTAAAGAAAATTTGTGGTGATAATCTTCCTGAATGGATATCTTTTCCTGTATATGAACAGGTGAAATGGCTAAACAAGGAACTGACCAAACTTTGGCCATTTGTGGCAGAAGCAGCAACTATGGTGATCAGAGAATCTGTTGAACCTCTGCTGGAAGATTACAGACCTCCTGGAATTACTTCATTGAAGTTCAGCAAGCTGTCACTTGGAAACGTGGCTCCAAAAATTGAAGGTATTCGTGTCCAGAGTCTTAAGAAAGGTCAAATCATAATGGACATTGATTTCCGCTGGGGTGGTGATCCCAGTATTATTTTGGCTGTTGAAGCTGCACTTGTTGCATCAATCCCTATTCAGTTGAAGGATCTACAGGTTTTCACCATTATCCGTGTTATATTCCAACTCGCTGAAGAGATTCCTTGCATTTCTGCTGTTGTTGTTGCTCTGCTTGCTGAGCCAAAGCCCAAGATTGATTATACTTTGAAAGCTGTTGGTGGAAGTTTGACAGCTATTCCTGGAATTTCGGATATGATTGATGATACTGTCAAATCAATTGTTACTGACATGCTCCAATGGCCTCATAGGATTGTAGTTCCACTAGGCGGTATTCCTGTTGATATTAGTGAACTAGAGCTTAAGCCCCAGGGAAAACTTACAGTGACTGTGGTGAGAGCGAATGATTTAAAGAATATGGAAATGATTGGAAAGTCAGATCCTTATGTAGTTATGCATATTCGACCATTATTTAAGTATAAGACCAAGGTTATTGATAACAACTTGAATCCTATTTGGGATCAGACATTTGAGCTGATTGCAGAAGACAAGGAGACCCAGTCACTCATTCTTGAGGTTTTTGATAAAGACATTGGGCAAGATAAGCGATTGGGAGTAGTACAGTTACCCCTTATTGATCTGGAAGCAGAAACAGTAAAGCACCTAGAATTGAGGCTGCTGGCATCACTTGATACACTGAAGGTGAAAGATAAGAAGGATCGAGGAACCTTGACAATAAAGGTCTTGTATCATCAGTTTAACAAGGAAGAGCAATTGGTCGCTTTAGAAGCAGAAAAAAAGATAATGGAAGACAGGAAGAAACTGAAAGAGGAGGGAATCATAGGAAGCACAATGGATGCACTAGATGGAGCAGTATCAGTGGTAGGGTCTGGTGTTGGGCTTGTTGGTACCGGCGTTGTTGCTGGTGCTGGGTTTGTGGGAAGTGGCATTGGCACTGGAGCTGGCCTTGTTGGCAGCAGCATTGGTGCTGGAGCCGGCCTTGTTGGCAGCAGCATTGGGGCTGGAGCCGGCCTTGTTGGGAGTGGTTTTGGAGCCTTTGGTAGTGGACTGAGCAAGGCGGGGAAGTTTGTTGGCAGGACAATCACAGGTAGAAAGAGTGGTTCTACTACCCCAGTCAATAATGCACTGGAGAATGGTGGTGGTGCAAAGCCTCTTTGA 1596 0.4386 MGLISGIFLGMVFGIALMAGWERMMRYRSAKRIAKAVDIKLLGSLNRDDLKKICGDNLPEWISFPVYEQVKWLNKELTKLWPFVAEAATMVIRESVEPLLEDYRPPGITSLKFSKLSLGNVAPKIEGIRVQSLKKGQIIMDIDFRWGGDPSIILAVEAALVASIPIQLKDLQVFTIIRVIFQLAEEIPCISAVVVALLAEPKPKIDYTLKAVGGSLTAIPGISDMIDDTVKSIVTDMLQWPHRIVVPLGGIPVDISELELKPQGKLTVTVVRANDLKNMEMIGKSDPYVVMHIRPLFKYKTKVIDNNLNPIWDQTFELIAEDKETQSLILEVFDKDIGQDKRLGVVQLPLIDLEAETVKHLELRLLASLDTLKVKDKKDRGTLTIKVLYHQFNKEEQLVALEAEKKIMEDRKKLKEEGIIGSTMDALDGAVSVVGSGVGLVGTGVVAGAGFVGSGIGTGAGLVGSSIGAGAGLVGSSIGAGAGLVGSGFGAFGSGLSKAGKFVGRTITGRKSGSTTPVNNALENGGGAKPL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1432 531 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 468 526 IPR045050 GO:0008289
Apr10g1432 531 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 469 IPR045050 GO:0008289
Apr10g1432 531 SMART C2_3c 265 362 IPR000008 -
Apr10g1432 531 Coils Coil 391 411 - -
Apr10g1432 531 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Apr10g1432 531 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
Apr10g1432 531 MobiDBLite consensus disorder prediction 508 531 - -
Apr10g1432 531 ProSiteProfiles C2 domain profile. 247 363 IPR000008 -
Apr10g1432 531 Pfam C2 domain 264 359 IPR000008 -
Apr10g1432 531 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 468 526 - -
Apr10g1432 531 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 469 - -
Apr10g1432 531 MobiDBLite consensus disorder prediction 508 522 - -
Apr10g1432 531 Gene3D C2 domain 259 418 IPR035892 -
Apr10g1432 531 CDD C2 266 360 - -
Apr10g1432 531 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 262 391 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1432 Apr-Chr10 26667778 26675953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1432 266 356 Lipid Metabolism Gene Families AT4G00700 36.264 3.68e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1432 - - gmx:100777838 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1432 10 26667778 26675953 Apr10g1432 10 26667778 26675953 ECH