Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1428 ATGAACGGCGGTGGAGGTGACTTGCCGCCGCCGGCAAACGGTGGTGAGTTCCTCCTCTCTCTTATTCAAGGACCAAACCACCACCCACAGCCGCCGCCACAATCTCCGGCGATAGATCCCGCCGTCGCTGTCGTAGGCCCCACGATTCCCGTCGCCGCTTCTTCTTGGCCAATCAATGGTGCCGATCATCTTCTTCATCATCATCAGCATCAACATCAACATCAACATCATCAACTTCCTCCATGGTCTCACACTCTCTCTTCTTCACCTTACCCTCCAAACTTTTTCGGGTTGCCCCATAACCCGTTTCCCGCTCCTCGGGTACCCGCAACCCACTACCCTTCCACCTCAATTCCCGTTTCTAACGCCGTTAGCCTCACTCACGATCTGCGAAAATTAGGGTTTCCAATTGAAGAAAACGACAATAGCAACAATAGGGTCGACGCTTTTGTTCAGCAGCAGAAGCAGCAAGAGCTGAAGTTAAAGTTCGGTTCTTTACCCACTGTTGCTTATACTGCATCTGAAGTTTCTCCCAATAGGGACTCGTTGCTCAATTTGAAGTTCAACAGAAGCCACAACGGGTTCGATAGGAACTTGCATGTGGACCCCAAGGCTAGTCCCAATTCGAATTCGACTGGGAATTTGGTTCTTCATGGTAATCATGATGATTTTGACAAAGAAAGAAGGGGTCTTGGGAACTTTAGGGCTATTGGGTCATCATCCCCTGAGCCAAGTAGGGTTCCGCCGGGGTTTGGAAACATGACTAGGGGGAAGGGTCATTGGGGTAGAAAGCGTTCGGAGATTGGTGAGGATAGGGTTGGTGTTGTTGGTTCTGGTGAAACGGGTGTTAGGAATGTGAATTTGTATGCTAAGAGGGAAAGTGTGAGAATGGTGTCTGGTGAAAGGAGCAATGCAAGAGGCAATGTCGTTCGTGAAATGGGGCTTCCTGATCAGCTTGACCACCCTGGTCCACCCACTGGGAGTAATCTTCATTCGGTTAATGAGATTGGCATTGTTGAAGATGGGGTTGGAGATAAGCATAAGGGTGGTGGTCGATCAAGAATGGAGGCTATTCGTGGTGCTGATGTTGGTGTCCTTGAGGAGCAGTTAGCCGATTCCTTGTTGCTTGAGGATGAGTCCGATGACAAGAATATCTCGAGGCAACGCCGTGGTGCTCGGGAGAAGGATGCTAGATCGTCAGATTCAAGAGGACAGCATCTTCTAAGCCAGCGGGCAAGAATGTATAAAAGACAGATGATGTGTCGAAGGGACATAGATATTCTTAATGTTCCTTTCCTTGCGATATATGAGTCTCTAATACCTCCTGAAGAAGAAAAGCTGAAGCAAAAGCAATTATTAGCGGTTTTGGAGAAATTAGTTAGCAAGGAATGGCCAACAGCTAAGCTTTATCTCTATGGATCATGTGCTAATTCATTTGGTGTTTCTAAAAGTGACATTGATGTTTGCCTTGCCATTGAGGAAGCTGACTTGGACAAATCCAAGATTATAATGAAATTGGCAGATATTTTGCAATCGGACAATCTACAGAATGTGCAGGCATTGACACGAGCACGGGTTCCTATAGTAAAGCTCATGGATCCAGTGACAGGAATCTCTTGCGACATCTGCATTAACAATCTCCTAGCTGTTGTGAATACAAAGCTTCTTCGGGATTATGCACGCATAGATGCAAGGTTACGTCAGCTGGCTTTTATTATTAAACATTGGGCAAAGTCAAGAGGAGTCAATGAAACTTACCATGGGACCTTATCTAGCTATGCGTATGTATTGATGTGCATTCATTTTTTACAACTTCGAAGACCTGCTATCCTTCCATGCTTACAGGAGATGGAGGCAACATATTCTGTTACTGTGGATGACATTGATTGTACTTACTTTGATCAAGTTGAAAAACTTTGTGATTTTGGGGTCCATAACAAGGAAACAATTGCTCAACTCGTGTGGGGATTTTTCTATTATTGGGCATATTGTCATGATTATGCAAATACTGTTATATCTGTACGTACCGGAAGCATAATCAGCAAGCGAGAGAAGGACTGGACAAGGAGGATTGGTAATGATCGACATTTAATATGTATAGAGGATCCTTTTGAAATATCTCATGATCTGGGTCGAGTGGTAGACAAACATAGCATCAAAGTTCTCAGGGAAGAGTTTGAACGTGCTGCAGATATTATGCAGTATGATCCAAGTCCATGTATTAAACTTTTTGAGCCTTATGTTCCTAGTTGA 2253 0.4501 MNGGGGDLPPPANGGEFLLSLIQGPNHHPQPPPQSPAIDPAVAVVGPTIPVAASSWPINGADHLLHHHQHQHQHQHHQLPPWSHTLSSSPYPPNFFGLPHNPFPAPRVPATHYPSTSIPVSNAVSLTHDLRKLGFPIEENDNSNNRVDAFVQQQKQQELKLKFGSLPTVAYTASEVSPNRDSLLNLKFNRSHNGFDRNLHVDPKASPNSNSTGNLVLHGNHDDFDKERRGLGNFRAIGSSSPEPSRVPPGFGNMTRGKGHWGRKRSEIGEDRVGVVGSGETGVRNVNLYAKRESVRMVSGERSNARGNVVREMGLPDQLDHPGPPTGSNLHSVNEIGIVEDGVGDKHKGGGRSRMEAIRGADVGVLEEQLADSLLLEDESDDKNISRQRRGAREKDARSSDSRGQHLLSQRARMYKRQMMCRRDIDILNVPFLAIYESLIPPEEEKLKQKQLLAVLEKLVSKEWPTAKLYLYGSCANSFGVSKSDIDVCLAIEEADLDKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYARIDARLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCIHFLQLRRPAILPCLQEMEATYSVTVDDIDCTYFDQVEKLCDFGVHNKETIAQLVWGFFYYWAYCHDYANTVISVRTGSIISKREKDWTRRIGNDRHLICIEDPFEISHDLGRVVDKHSIKVLREEFERAADIMQYDPSPCIKLFEPYVPS* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1428 750 MobiDBLite consensus disorder prediction 234 263 - -
Apr10g1428 750 CDD NT_PAP_TUTase 450 560 - -
Apr10g1428 750 MobiDBLite consensus disorder prediction 377 402 - -
Apr10g1428 750 MobiDBLite consensus disorder prediction 1 37 - -
Apr10g1428 750 Pfam TUTase nucleotidyltransferase domain 444 542 IPR045100 GO:0016779
Apr10g1428 750 MobiDBLite consensus disorder prediction 377 408 - -
Apr10g1428 750 PANTHER UTP:RNA URIDYLYLTRANSFERASE 1 67 749 - -
Apr10g1428 750 SUPERFAMILY Nucleotidyltransferase 425 560 IPR043519 -
Apr10g1428 750 SUPERFAMILY PAP/OAS1 substrate-binding domain 565 734 - -
Apr10g1428 750 Gene3D Beta Polymerase, domain 2 449 562 IPR043519 -
Apr10g1428 750 Pfam Cid1 family poly A polymerase 650 708 IPR002058 -
Apr10g1428 750 Gene3D - 563 731 - -
Apr10g1428 750 PANTHER POLY A POLYMERASE CID PAP -RELATED 67 749 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1428 - - gmx:100812787 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1428 10 26615650 26620931 Apr10g1428 10 26615650 26620931 ECH