Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1427 ATGGACACTAGCGTACATTGTGAAAATAGGGACACTAGTGTCCCAGTTGTAGGGACACAAAGAATCGTGTCTGCAACCATCTACTTCAACCGAGAGGACCCAAACCGCATCGCCATTGCACCTGCAGCTGAGGTAATGCTCTTTGTGGTGACCATTTGTGAGGATCCTTTGGAAAAGGAAGGGAAGATGCCAGCATCAACAGCTGCTACCGTAACCCGGAAGCTTCGTCGATCAACTGATGATGCTAGCATGGAGAGCTTGAATCCACAGTCCGATATCGGGACAATGTTGGATAGCCTAGGTTTCACTCCGGACGAGGTCATACACTTTGGAGTGAAGTTTGCACAGAACCCAGATTTGAAGACTACCTTTTGGAGCATGAGTATATCAGGCAAGCGAGTTGGGATTGTTGGATTGGGAAGTATTGGCATGGAAGTGGCTAAGCGGCTTGAGGGTTTTGGTTGCATTATCTTATACCACTCTAAGCATCAAAAAGCTGTTTCGTACCCTTTCTTTTCTAATGTTACTGAGCTTGCAACTACTTGCAACGCACTTGTGGTTTGTTGTGCATTGAATGAGGAAACAAAACACATAATTAACAAGGATGTCATTTTGGCATTAGGAAAAGAAGGGTTTATTGTGAATGTAGGAAGAGGGGCTCTCATTGATGAAAAGCAATTGGTCAAGTGTTTGATGGAAGGTAAAATTGGAGGTGCTGGTTTGGATGTGTTCGAGAACGAGCCTTGTGTTCCTGAAGAGCTACTTGCAATGAATAATGTGGTTTTATCTCCCCATTGTGCTTCTTTTACTTTAGAAACTATAATGAGTTTGTGTGAACTTGTGGTAGGGAATTTGGAAGCATTCTTCTCTAATAAACCCCTAATTACTCCAGCGATTTTGGTTTAA 906 0.4327 MDTSVHCENRDTSVPVVGTQRIVSATIYFNREDPNRIAIAPAAEVMLFVVTICEDPLEKEGKMPASTAATVTRKLRRSTDDASMESLNPQSDIGTMLDSLGFTPDEVIHFGVKFAQNPDLKTTFWSMSISGKRVGIVGLGSIGMEVAKRLEGFGCIILYHSKHQKAVSYPFFSNVTELATTCNALVVCCALNEETKHIINKDVILALGKEGFIVNVGRGALIDEKQLVKCLMEGKIGGAGLDVFENEPCVPEELLAMNNVVLSPHCASFTLETIMSLCELVVGNLEAFFSNKPLITPAILV* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1427 301 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 126 297 - -
Apr10g1427 301 Gene3D - 125 270 - -
Apr10g1427 301 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 122 267 IPR006140 GO:0051287
Apr10g1427 301 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 134 161 IPR029752 -
Apr10g1427 301 Gene3D - 271 294 - -
Apr10g1427 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 123 268 IPR036291 -
Apr10g1427 301 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 126 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1427 Apr-Chr10 26595183 26600069 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1427 - K15919 gmx:100776772 286.96