Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1426 ATGCCAAAGATCACAAGACTCAACATTTCAATGGCTGAACGACAAAACAAAAATGTTGAAGATCTCCCAAAAGTGCTTGTTCTTGGACTTCACAAATGCTACGCATCGATTATACCACACTATTCTCACAAGTTCCATTTCCTAGACCCCAAACTCTCTGGGCTCTCACTGCATCACTTCATCGTTGCTCACAATCACCAACCTTCATCCATTCCCGCCATTCTCTGCAGCACCACCTACTCCATCTCCGCCGATGTCCTCCGCCTCCTTCCGTCGCTCCGCCTCGTCGTCACAACCAGCTCCGGGACCGATCATATAGATCTCAACGAGTGCCGCCGCCGGGGAATCCAAGTAGCCGCCGCCGGTGGGGTGTTCTCCGAGGATGTCGCCGACATGGCCGTGGCTTTGCTTATTGACGTGGTGAGGAAAATATCGGCGGGAGATCGATATTTAAGGACACAGAATCACTCCACATGTTTGGATTTTCCCCTCGTTGATTCTAAGTTATCATGCAAGCGAGTTGGGATTGTTGGATTGGGAAGTATTGGCATGGAAGTGGCTAAGCGGCTTGAGGGTTTTGGTTGCATTATCTCATACCACTCTAAGCATCAAAAAGCTGTTTCGTACCCTTTCTTTTCTAATGTTACTGAGCTTGCAACTACTTGCAACGCACTTGTGGTTTGTTGTGCATTGAATGAGGAAACAAAACACATAATTAACAAGGATGTCATTTTGGCATTAGGAAAAGAAGGGTTTATTGTGAATGTAGGAAGAGGGGCTCTCATTGATGAAAAACAATTGGTCAAGTGTTTGATGGAAGGCCAAATTGGAGGTGCTGGTTTGGATGTGTTCGAGAACGAGCCTCGTGTTCCTGAAGAGCTACTTGAAATGAATAATGTGGTTTTATCTGCTCATCATGCTGCTGCAACTGCAGAATCCAAAATCCTTTTGATTGAACTTGTGATTGGGAATTTAGAAGCCTTCTTTTCAAATAAGCCCCTAATCTCACCAGTGATTTTGGTTGAATAA 1029 0.4538 MPKITRLNISMAERQNKNVEDLPKVLVLGLHKCYASIIPHYSHKFHFLDPKLSGLSLHHFIVAHNHQPSSIPAILCSTTYSISADVLRLLPSLRLVVTTSSGTDHIDLNECRRRGIQVAAAGGVFSEDVADMAVALLIDVVRKISAGDRYLRTQNHSTCLDFPLVDSKLSCKRVGIVGLGSIGMEVAKRLEGFGCIISYHSKHQKAVSYPFFSNVTELATTCNALVVCCALNEETKHIINKDVILALGKEGFIVNVGRGALIDEKQLVKCLMEGQIGGAGLDVFENEPRVPEELLEMNNVVLSAHHAAATAESKILLIELVIGNLEAFFSNKPLISPVILVE* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1426 342 Gene3D - 126 310 - -
Apr10g1426 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 126 308 IPR036291 -
Apr10g1426 342 Gene3D - 68 333 - -
Apr10g1426 342 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 174 201 IPR029752 -
Apr10g1426 342 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 70 157 - -
Apr10g1426 342 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 20 338 - -
Apr10g1426 342 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 134 307 IPR006140 GO:0051287
Apr10g1426 342 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 20 338 - -
Apr10g1426 342 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 73 338 IPR006139 GO:0016616|GO:0051287
Apr10g1426 342 CDD HPPR 67 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1426 Apr-Chr10 26588348 26593404 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1426 - K15919 gmx:100776772 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1426 10 26588348 26593404 Apr10g1426 10 26588348 26593404 ECH