Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1424 ATGCCAGTGCCTAACCCATCATTGCTTACACCTCAAAACACCATAGAAAATGGCATGGAAGGAGAGAAACTAAAACTTGATGCATCTTTTACACCAAACCAAGATATCATACCCTCTCAGTTCATATGGCCAGACCATGAGAAGCCATGCCTAAAACCACCAGAACTCCAAGTTCCACCAATTGACATGAAGGCCTTTCTCTCAGGAGATCCACAAGCTATGTCAAATGTTTGTGCAAAAGTGAATGAGGCATGCAGGAAGCATGGCTTCTTTCTTGTTGTTAATCATGGAGTTGATAACAACCTCATAGCTCAAACTCATAAGCTCATAGATGATTTCTTCTGCATGCAACTGTCAGAGAAACAAAGGGCTCAGAGAAAGGTTGGAGACCATTGTGGCTATGCTAATAGCTTCATAGGAAGGTTCTCCTCCAAACTTCCTTGGAAGGAAACACTTTCTTTCCGTTACTCTGCTGACAAGTCCACCAAAACTGTGGAGGACTATTTTGTTAATGTCATGGGAGAAGATTTCAGGCAATTTGGGAGAGTGTACCAAGAATACTGTGAAGTCATGAGCAATCTCTCTCTTGGGATCATGGAGGTTCTTGGGATGAGCCTAGGAGTTGGCAGAGAATATTTCAGAGATTTCTATGAAGGAAATGACTCCATAATGAGATTGAATTACTACCCACCATGCCAAACACCTGAGTTAGCTTTAGGAACTGGCCCTCATTGTGACCCTACATCCCTAACCATTCTCCACCAAGATCAAGTTGAGGGTCTCCAAGTCTTTGTGGATGATATATGGTACTCTGTCGCTCCAAAAGAAGATGCATTCGTTGTGAACATCGGTGACACATTTATGGCTCTATCAAATGGGATTTTCAAGAGTTGCTTGCATAGAGCAGTAGTGAATAACAAAGTTGTGAGAAAATCACTTGCTTTCTTTCTATGTCCAAATGAAGACAAAGTGGTCACTCCTCCACAGGAATTAATTAGCATTGAGAATCCAAGATTGTATCCAGATTTCACATGGCCAAGTCTTCTTGAATTTACACAGAAGCATTATAGGGCTGACACAAGAACTCTTGATGCTTTCTCGAGGTGGTTACAAGAGAAAAACAACTAG 1128 0.4167 MPVPNPSLLTPQNTIENGMEGEKLKLDASFTPNQDIIPSQFIWPDHEKPCLKPPELQVPPIDMKAFLSGDPQAMSNVCAKVNEACRKHGFFLVVNHGVDNNLIAQTHKLIDDFFCMQLSEKQRAQRKVGDHCGYANSFIGRFSSKLPWKETLSFRYSADKSTKTVEDYFVNVMGEDFRQFGRVYQEYCEVMSNLSLGIMEVLGMSLGVGREYFRDFYEGNDSIMRLNYYPPCQTPELALGTGPHCDPTSLTILHQDQVEGLQVFVDDIWYSVAPKEDAFVVNIGDTFMALSNGIFKSCLHRAVVNNKVVRKSLAFFLCPNEDKVVTPPQELISIENPRLYPDFTWPSLLEFTQKHYRADTRTLDAFSRWLQEKNN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1424 375 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 22 371 - -
Apr10g1424 375 Pfam 2OG-Fe(II) oxygenase superfamily 221 319 IPR044861 -
Apr10g1424 375 Pfam non-haem dioxygenase in morphine synthesis N-terminal 58 161 IPR026992 -
Apr10g1424 375 Gene3D - 29 357 IPR027443 -
Apr10g1424 375 PANTHER GIBBERELLIN 20-OXIDASE 22 371 - -
Apr10g1424 375 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 219 319 IPR005123 -
Apr10g1424 375 PRINTS Isopenicillin N synthase signature 81 98 - -
Apr10g1424 375 PRINTS Isopenicillin N synthase signature 244 265 - -
Apr10g1424 375 PRINTS Isopenicillin N synthase signature 279 305 - -
Apr10g1424 375 SUPERFAMILY Clavaminate synthase-like 31 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1424 Apr-Chr10 26573199 26575112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1424 12 357 Glycosyltransferase AT5G59530 28.889 8.01e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1424 K05282 - gmx:100775693 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1424 10 26573199 26575112 Apr10g1424 10 26573199 26575112 ECH