Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1421 ATGGGTTCCGAAGCGAAAGACACGCAAATTCAGAATCCAACTGAAACAGAAAACCCCAACGACAAACTTAATACCGTTTCACTTTCACCCGAAAATCACGCTAACGGCTATCAACCCGTTACTACCAACAACCATATTACTACTACTTACCCTTATGGCGGTGACCGTACCTTAAGTCACAGCCAAGTAGCGTTAGTACAGCCTCATTCACTTCTCCCCACGCCCATGCCGCCGCAGATTATGAAACCCAACACAAACGGCCACGTTCCGTCCACCTTCCCCGTCGCCGGCACCATGCCAGCCATCGGAAGCTTTCTCCGGCAGCGGAGCAGCGACCTCTCGGCGGCGATCGCGAAGCGCGTCTCGTCGTTCCGGCAGTCCGTGGAAGAAAACGACGAGTCGTATAGAGAGGGGAATCGCGAAGTGACGGAGTTCAACCTGTCTGGAGTCAAGGTCGAGGTGAAGCTGAAACAGGAGGAGGAACCGGCGATGAAAGGACGAATTAGCTTCTTCTCGAGGTCCGGTTGCAGGGACTGCACGGCGGTGCGGAGATTCTTCCAAGAGAAAGGGCTTAGGTTCGTGGAGATCAACGTCGACGTGTTCGGCGAGAGAGAGATGGAGCTACGAGAGAGAACAGGAACCGTTTCGGTGCCGCAGATTTTCTTCAACGAGAAGCTGATCGGAGGATTGGTGGCGCTGAACTCGCTGCGGAACAGCGGCGAGTTTGACCGGAGGGTGGCGGAGATGGTCGCCGAGACTGTTCCCGGCGGCGATGCGCCTATGCCGCCGGCGTACGGATTCGATTATGTGATTGACGATGGGATTGACGAGATGGTTGGGGTGGTTAGGGTTTTGCGGCAGAGATTACCGATACAGGACCGGTTGAAGAGGATGAAGATGGTTAAGAACTGCTTCGAAGGGAACGAGTTGGTGGAGATTCTGATTCAGCACTTCCATTGCGCGCGTAACGAGGCTGTTGAGATCGGAAAACAGTTGTCCAGGAGGCACTTCATCCATCATGTTTTTGGGGAAAATGAATTTGAGGAGGGAAATCATTTATATCGTTTCCTTGAGCATGAACCTTTTATCCCCAGATGCTTTAACTTTCGTGGTAACACGAATGACAGTGAACCAAAGACTGCAGCTGCAATATTCGCTAGGCTTACCAAGATTATGTCTGCCATTCTTGAGTCTTACGCTTCTGATGATAGGGAACATGTTGATTATGAGGCCATTAGCAAAAGTGAGGAATTTCGTAGGTATGTAAATATGACTCAGGATCTGCAGCGAGTGAATCTCTTGGAACTATCAGAAAACGAGAAGCTTGCTTTCTTCTTAAATCTGTATAATGCTATGGTCATCCATGCTTTTATTAGTGTAGGGTGTCCAGAAGGTGTAATTGATAGGAGATCCTTCTTCAATGATTTCCAGTATTTGATTGGAGGGCATCCTTATTCTCTTAATATTATCAAAAATGGGATCCTAAGATGCAACCGGAGGTCACCATATTCCTTAGTGAAGCCCCTTAGCACAGGAGACAACCGTTTAGAGGTTGCTCTAGTCAAGTTTAATCCGTTATTACACTTCGGACTTTGTAATGGTACAAAGTCTAGCCCAAAGGTGAGGTTCTTCTCACCCCATAGAGTTGTAGATGAATTAAGGGGAGCTGCAAGAGAGTTCTTTGAGAATGATGGAATTGAAGTGGACCTGGAGAAGAGAACCGTTCATCTAACTCGGATTTTCAATTGGTTTAGTGGGGATTTTGGACAAGAGAAAGACATACTAAGGTGGATAATTAATTACTTGGATCCAAATAAAGCAGGTCTCTTGACACATCTTTTGGGAGATAATGGACCGGTTTATATCTCTTACCAGACTTTTGATTGGTCAATAAATTCTTGA 1902 0.4753 MGSEAKDTQIQNPTETENPNDKLNTVSLSPENHANGYQPVTTNNHITTTYPYGGDRTLSHSQVALVQPHSLLPTPMPPQIMKPNTNGHVPSTFPVAGTMPAIGSFLRQRSSDLSAAIAKRVSSFRQSVEENDESYREGNREVTEFNLSGVKVEVKLKQEEEPAMKGRISFFSRSGCRDCTAVRRFFQEKGLRFVEINVDVFGEREMELRERTGTVSVPQIFFNEKLIGGLVALNSLRNSGEFDRRVAEMVAETVPGGDAPMPPAYGFDYVIDDGIDEMVGVVRVLRQRLPIQDRLKRMKMVKNCFEGNELVEILIQHFHCARNEAVEIGKQLSRRHFIHHVFGENEFEEGNHLYRFLEHEPFIPRCFNFRGNTNDSEPKTAAAIFARLTKIMSAILESYASDDREHVDYEAISKSEEFRRYVNMTQDLQRVNLLELSENEKLAFFLNLYNAMVIHAFISVGCPEGVIDRRSFFNDFQYLIGGHPYSLNIIKNGILRCNRRSPYSLVKPLSTGDNRLEVALVKFNPLLHFGLCNGTKSSPKVRFFSPHRVVDELRGAAREFFENDGIEVDLEKRTVHLTRIFNWFSGDFGQEKDILRWIINYLDPNKAGLLTHLLGDNGPVYISYQTFDWSINS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1421 633 MobiDBLite consensus disorder prediction 1 47 - -
Apr10g1421 633 Gene3D Glutaredoxin 162 249 - -
Apr10g1421 633 SUPERFAMILY Thioredoxin-like 165 247 IPR036249 -
Apr10g1421 633 Gene3D - 275 415 IPR036388 -
Apr10g1421 633 Pfam Glutaredoxin 170 227 IPR002109 -
Apr10g1421 633 PANTHER F26K24.21 PROTEIN 35 633 - -
Apr10g1421 633 ProSiteProfiles Glutaredoxin domain profile. 156 253 - -
Apr10g1421 633 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 289 356 IPR000591 GO:0035556
Apr10g1421 633 SMART DEP_3 285 358 IPR000591 GO:0035556
Apr10g1421 633 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 35 633 - -
Apr10g1421 633 Pfam Protein of unknown function, DUF547 435 560 IPR006869 -
Apr10g1421 633 CDD DEP 277 355 - -
Apr10g1421 633 ProSiteProfiles DEP domain profile. 285 358 IPR000591 GO:0035556
Apr10g1421 633 SUPERFAMILY "Winged helix" DNA-binding domain 277 376 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1421 Apr-Chr10 26527150 26532093 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1421 - - gmx:100810111 982.63