Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1415 ATGAGTTTAATCTTACGGCTTTTCTTGCTAGCCTTCTGCCACATAAACTTGAGCCTCAATGTCATTTTGGTGACTGGCCATCAACAATCATTGTTACTCCAGCTGAAGAACAATCTCATATTCAATTCAACCAAGTCTAACAAACTAATATATTGGAACCAAAGTGATGATTGTTGTGAATGGAATGGAGTATCATGCAATAAGGGACGCATTGTAGCTCTTGACCTGAGCCAAGAATCTATTTCTGGAAGTAGAGAAAATTTGAGCAGTGTCTTCAACTTGCAACATCTAGAGAGTTTAAATCTGGCCTATAATGAATTCCATTCTGGTATTTATGTAGGGTTTCAAAAGCTAAAGAATTTGAGGTATTTAAATTTGTCAAATGCTGGCTTTGAAGGACAAATTCCTATTGAGATTTCTTACTTGACAAAGTTGACAACTCTTGATTTGTCTAGCACAGTTACCTCACAACATGCTCTAAAGCTTGAGAGGCCAAATATTGCAATGCTTGTGCAGAACCTCACAGAAATCAAAGAACTATATATAGATGGCATAGCAATATCAATCAAGGGAAAGGAGTGGAGCTATGCTTTATCTTCACTTAAAAACTTACAAGTTTTAAGTATGTCATCTTGCAATATCTCTGGTCCTTTAGATTCATCATTGGCAAAACTTCAATCTCTTTCAAAACTTAGATTGAACCACAACATCATAGCAAGCCCAGTGCCATGGTCTTTTGGGAATTTGTCTAATTTGACCACCTTGCAACTCAGTGCCTGTGAGTTGAGTGGAACCTTTCCAAAAAGTATATTCCAAATATCATCACTAAAGGTGCTTGATGTGTCAAATAATCCAAGTCTTCATGGTTCTCTACCAAACTTCCCATCTCAAGTATCTCTCCACAACCTCAACCTTAGTCACACAAATTTTTCAGGACCTTTGCCAGATTCTATTCACAATTTGAAGCAATTGTCTAAATTAGATATATCAAATTGCCAATTTAGAGGGACACTTCCTTACTCAATGTCAAATCTTACCCAACTTGTTCATCTAGACTTGTCATACAATAACTTCACTGGTCCTATTCCATCTTTCAATAGGTCCAAGTCCCTTGCAATTTTATCCCTTAATCATAATAATTTTAAGGGTGCAATTCCATCTAGCTATTTTGAGGGCCTTAAAAATCTCATAAGCATTGATTTAGGAGATAACTCCTTTGATGGAAGTGTCCCCTCATCTTTATTTAGACTTCAATCTCTTCAATATCTCATGCTTTTTTACAACAAATTTGATGGCATGCTGGAAGAATTTCCAAATGCTTCTTCATCATTATTAGAGATTGTTGATTTAAGTGGCAACAATTTTGAAGGGCCTATTCCGATGTCTATCTTTCAACTCAAAAGTCTTCGTTTGCTTCAACTTTCTGAAAACAAGTTCAATGGCACTATAGAGCTTGGTATGATTGGGAGGTTGCAAAATTTGACTTCACTTGATCTTGCACACAATAACTTATTAGTTGATGCAAACATTAGGGATGACCATGATGCACCATCCTTTCCCAATTTGAAAACTCTCTGGTTGGCTTCATGCAATTTGAGTGCATTCCCTGAATTTTTGAGAAATAAATCTGAACTACTATACCTAGACTTATCCAGCAACCAAATTGAAGGAACAATACCCAATTGGATTTGGAAATTTAATTATATGGTTGTCTTGAATCTTTCCTACAACTTTTTAACAGATTTTGAAGGGCCTTTCCAAAACCTTGGTTCAAATTTGCTAAAACTTGACCTTCATTCAAACCTTCTCCAAGGCCCTGCTCCTACTTTTTTGAAAAATGCCATTTATTTAGACTACTCAAGCAATAGATTCAGCTCTATTAGTTCAAAAGACATTGGCAGTCGCATTCCTTTCATATATTTTCTCTCTCTTTCAAACAACAGTTTTGGTGGAAGAATCCATGAATCGTTTTGCAATATTTCAGATCTTCGAGCACTTGATCTTTCCAATAATAGATTCAATGGTCCAATTCCTATGTGTTTAACAAGACGAAGTAGCACTCTAAGGCTACTAAATCTTGGTGGAAATGAGCTCACTGATCACATTTCAGATACATTCACAACTTCATGTTCTCTAAGGGTTTTGGATCTCAGTGGAAATCTTTTGAAGGGAACCATCCCAAAATCCTTGGCTAACTGCCAAAAACTACAAGTGCTAAACCTTGGAAATAATCAATTAGTTGACAGATTTCCTTGCTTCTTGAATAGCATCTCTTCCCTCAGAGTCATGATTTTAAGGTCAAACAATTTACATGGGCATCTTGGATGTCCCAATAACATTGGAAATTGGGATACACTTCAAATTGTTGATCTAGCCTCTAACAATTTCAACGGTATATTACCAACAACACTCTTACAAAGCTGGAAAGGATTGATGCATGCTGAAAATGAAGGTGAACAATCTGGTCATTTATTTTTTAATCTCTATGATGACTTTAATCCTTTGAATTTTAAGACTGCAATAGTAGATCTCAACAGTGAGCTTCAAATGAAATTAGCTAAAATTACAGCAACAGAACCACCCTTTATAATTGACCTCATAGTTTCTCATATCTTTGAAGAGGGTGTTGGTATTAGAAATTATGAGGATTCAGTTACAATTGTCAACAAAGGTCAACAGCTAAATTTTGCTAAAATCCTCATCGCTTTCACTTCCTTAGACTTTTCATCCAACAACTTTGAAGGGCCAATACCACCAGAGCTTATGAAACTCACAGCACTGCATGCTCTTAACTTGTCACAAAATGCTTTCTCAGGTAGCATCCCTTCTTCTTTAGGCAATCTAAAACATCTTGAGTCCTTAGACCTCTCAAACAACTCTTTAAGTGGAAACATTCCTATAGAGCTTGCAAGCTTATCTTTTCTTTCAGTCATGAACCTCTCCTACAATCATTTGGTGGGAAAAATACCTTCAGGAACACAAATTCAGACATTTGAATCAAATTCATTTATGGGCAATGAAGGGTTATATGGGCCCCCTTTGACCCAAAATTATAGTGGTGAAGGAGATCAAGGGTTGTCACCAGCAGCATCTCATACAGGGACTTCAATCAATTGGAATTTCTTAAGTGCAGAATTAGGATTTACTTTTGGCTTTGGAATTCTCATCGTACCCCTTATTTTCTGGAAGAGGTGGAGAACATGGTATTCCAAGCATGTAGATGAACTCCTTTGCAACATCATTCCTCAACTTGATTTTGTTTATGAACATCGTGGGGAAACAAAATATAGAATTTTAAAGTGGAAGCCTTATTGA 3315 0.3638 MSLILRLFLLAFCHINLSLNVILVTGHQQSLLLQLKNNLIFNSTKSNKLIYWNQSDDCCEWNGVSCNKGRIVALDLSQESISGSRENLSSVFNLQHLESLNLAYNEFHSGIYVGFQKLKNLRYLNLSNAGFEGQIPIEISYLTKLTTLDLSSTVTSQHALKLERPNIAMLVQNLTEIKELYIDGIAISIKGKEWSYALSSLKNLQVLSMSSCNISGPLDSSLAKLQSLSKLRLNHNIIASPVPWSFGNLSNLTTLQLSACELSGTFPKSIFQISSLKVLDVSNNPSLHGSLPNFPSQVSLHNLNLSHTNFSGPLPDSIHNLKQLSKLDISNCQFRGTLPYSMSNLTQLVHLDLSYNNFTGPIPSFNRSKSLAILSLNHNNFKGAIPSSYFEGLKNLISIDLGDNSFDGSVPSSLFRLQSLQYLMLFYNKFDGMLEEFPNASSSLLEIVDLSGNNFEGPIPMSIFQLKSLRLLQLSENKFNGTIELGMIGRLQNLTSLDLAHNNLLVDANIRDDHDAPSFPNLKTLWLASCNLSAFPEFLRNKSELLYLDLSSNQIEGTIPNWIWKFNYMVVLNLSYNFLTDFEGPFQNLGSNLLKLDLHSNLLQGPAPTFLKNAIYLDYSSNRFSSISSKDIGSRIPFIYFLSLSNNSFGGRIHESFCNISDLRALDLSNNRFNGPIPMCLTRRSSTLRLLNLGGNELTDHISDTFTTSCSLRVLDLSGNLLKGTIPKSLANCQKLQVLNLGNNQLVDRFPCFLNSISSLRVMILRSNNLHGHLGCPNNIGNWDTLQIVDLASNNFNGILPTTLLQSWKGLMHAENEGEQSGHLFFNLYDDFNPLNFKTAIVDLNSELQMKLAKITATEPPFIIDLIVSHIFEEGVGIRNYEDSVTIVNKGQQLNFAKILIAFTSLDFSSNNFEGPIPPELMKLTALHALNLSQNAFSGSIPSSLGNLKHLESLDLSNNSLSGNIPIELASLSFLSVMNLSYNHLVGKIPSGTQIQTFESNSFMGNEGLYGPPLTQNYSGEGDQGLSPAASHTGTSINWNFLSAELGFTFGFGILIVPLIFWKRWRTWYSKHVDELLCNIIPQLDFVYEHRGETKYRILKWKPY* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1415 1104 Gene3D Ribonuclease Inhibitor 297 367 IPR032675 -
Apr10g1415 1104 ProSiteProfiles Leucine-rich repeat profile. 950 973 IPR001611 GO:0005515
Apr10g1415 1104 Gene3D Ribonuclease Inhibitor 614 1024 IPR032675 -
Apr10g1415 1104 Gene3D Ribonuclease Inhibitor 368 510 IPR032675 -
Apr10g1415 1104 Gene3D Ribonuclease Inhibitor 24 191 IPR032675 -
Apr10g1415 1104 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Apr10g1415 1104 Gene3D Ribonuclease Inhibitor 511 613 IPR032675 -
Apr10g1415 1104 Gene3D Ribonuclease Inhibitor 192 296 IPR032675 -
Apr10g1415 1104 SUPERFAMILY RNI-like 207 582 - -
Apr10g1415 1104 SMART LRR_typ_2 225 248 IPR003591 -
Apr10g1415 1104 SMART LRR_typ_2 393 417 IPR003591 -
Apr10g1415 1104 SMART LRR_typ_2 710 733 IPR003591 -
Apr10g1415 1104 SMART LRR_typ_2 519 542 IPR003591 -
Apr10g1415 1104 SMART LRR_typ_2 345 367 IPR003591 -
Apr10g1415 1104 SMART LRR_typ_2 924 947 IPR003591 -
Apr10g1415 1104 SMART LRR_typ_2 948 972 IPR003591 -
Apr10g1415 1104 SMART LRR_typ_2 491 517 IPR003591 -
Apr10g1415 1104 SMART LRR_typ_2 249 273 IPR003591 -
Apr10g1415 1104 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 1 1087 - -
Apr10g1415 1104 PRINTS Leucine-rich repeat signature 545 558 - -
Apr10g1415 1104 PRINTS Leucine-rich repeat signature 948 961 - -
Apr10g1415 1104 PANTHER LEUCINE-RICH REPEAT-CONTAINING, PLANT-TYPE, LEUCINE-RICH REPEAT DOMAIN, L-RELATED 1 1087 - -
Apr10g1415 1104 SUPERFAMILY L domain-like 640 1014 - -
Apr10g1415 1104 SUPERFAMILY L domain-like 59 187 - -
Apr10g1415 1104 Pfam Leucine rich repeat 445 504 IPR001611 GO:0005515
Apr10g1415 1104 Pfam Leucine rich repeat 370 430 IPR001611 GO:0005515
Apr10g1415 1104 Pfam Leucine rich repeat 687 746 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1415 Apr-Chr10 26401220 26404534 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1415 23 1065 Receptor kinase-like Gene Family AT1G47890 33.052 4.24e-135 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1415 - - gmx:100805833 1730.3