Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1409 ATGGCTTTCAACCACAGAAACAGAAAGGGACAAGTCTTAGGTTCAAAAGCCATAGCTGATGCAGCTTCATGGTACTGTGCTTTTCTCCTTGCGGCCCTCTTACTCCTAAGCATGTTTAGAGACAGCTCTATGCTTCCAAGTCATGCCAACTTCACAAACACCCAACTCTTGTCACGCCCATGCGATGAAATCTATGTTGTTGGAGAAGGTGAGACACTTCACACAATCAGTGACAAGTGTGATGACCCCTTTATAGTTGAAAACAACCCTCATATCCATGATCCTGATGATGTCTTCCCCGGCCTCGTTATCAAGATTACACCTTCACATCGTACCTAG 339 0.4513 MAFNHRNRKGQVLGSKAIADAASWYCAFLLAALLLLSMFRDSSMLPSHANFTNTQLLSRPCDEIYVVGEGETLHTISDKCDDPFIVENNPHIHDPDDVFPGLVIKITPSHRT* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1409 112 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN PROTEIN 1 111 - -
Apr10g1409 112 Gene3D LysM domain 52 112 IPR036779 -
Apr10g1409 112 CDD LysM 64 106 IPR018392 -
Apr10g1409 112 PANTHER EMBRYO SAC 1 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1409 Apr-Chr10 26342832 26343170 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1409 - - gmx:100815990 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1409 10 26342832 26343170 Apr10g1409 10 26342832 26343170 ECH