Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1392 ATGGGTGCTAGTTTTTCCTCTTGTGTTTGTGATGGTGATGCTACCGCTTTAAGGCCAAGGCTTGGTGATATACCTGAGAGTTGTGTGGCACTGGTGTTGATGTATTTGGATCCACCAGATATTTGCAAGCTAGCACGGTTAAACAGGGCATTTCGTGATGCTTCATTAGCTGATTTCATTTGGGAATCGAAGTTGCCTTTGAATTATAAGTTCATCATGGAAAAGGCTTTGAAGGATACTTGTGTGGCAGAGTTGGGGAAGAGGGACATTTATGCAAGACTATGTAGGCCTAATTTGTTTGACAATGAGACAAAGGAAATTTGGCTTGATAAGAGGACGGGTGGGGTTTGTTTGGCGATTTCTTCCAAAGCGTTAAGGATTACAGGGATAGATGATCGGAGATATTGGAATCGCATTTCTACCGAAGAGTCAAGATTCCATACAATTGCTTATCTTCAACAAATTTGGTGGCTTGAAGTGGAAGGAGATATTGATTTCCAATTTCCACCTGGAACATACAGTGTGTTCTTCAGACTCCAGCTTGGAAGGTCATCCAAGAGGTTGGGTAGGCGAGTTTGTAAGACTGAGGACATTCATGGATGGAATATAAAACCTGTGAAATTTCAGCTAACAACTTCTGATGGACAGCATGTTGTATCCCAGAGTCATTTGGATAATCCAGGGCACTGGATTCTCTACCATGCAGGGAACTTTGTTTCTAAGAATCCTAATGATTTGATGAAGATCAAATTTTCATTGACTCAAATTGATTGCACTCATACCAAAGGCGGTTTGTGTGTAGACTCTGTATTTATATGCCATAGTGATGATGTAAGAAAAGAGGTGTAG 849 0.4099 MGASFSSCVCDGDATALRPRLGDIPESCVALVLMYLDPPDICKLARLNRAFRDASLADFIWESKLPLNYKFIMEKALKDTCVAELGKRDIYARLCRPNLFDNETKEIWLDKRTGGVCLAISSKALRITGIDDRRYWNRISTEESRFHTIAYLQQIWWLEVEGDIDFQFPPGTYSVFFRLQLGRSSKRLGRRVCKTEDIHGWNIKPVKFQLTTSDGQHVVSQSHLDNPGHWILYHAGNFVSKNPNDLMKIKFSLTQIDCTHTKGGLCVDSVFICHSDDVRKEV* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1392 282 Pfam Phloem protein 2 116 272 IPR025886 -
Apr10g1392 282 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Apr10g1392 282 PANTHER F-BOX PROTEIN PP2-A13 1 280 - -
Apr10g1392 282 SUPERFAMILY F-box domain 19 75 IPR036047 GO:0005515
Apr10g1392 282 PANTHER F-BOX PROTEIN PP2-A15 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1392 Apr-Chr10 26165718 26169499 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1392 - - gmx:100814033 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1392 10 26165718 26169499 Apr10g1392 10 26165718 26169499 ECH