Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1385 ATGGTGATAAGCTCACGCACGCTAGAAATCACAGTTATATCGGGTGAAAACCTTCGCGTAATGGAGGACCCATACGTCGTCGTTCGGGCCGAGTCCTTAAACTGCTGCACCACGAAGATGGTCAAAGATAGTGGAAGCAACAACTCGAGTTTCTATGCATGGAATGAGAAGTTCATGATGAACGTGCCTATGTATGCACGCTCGATCACGTTCGAGGTACAATGCAACAAGTTCAAGGGTGTTCGACCCGTTGGGGTGGCCAGAATCGCGGTTTCGGATTTTCTAAACGACGCCGTGGCGGAAAATTGCTTGCAAGTGTTGAGTTACCGGTTGAGGGATTGGGAAGGGAAAAGAAATGGGGTTATTCATTTCGCGGTGAGGGTAGCAGCGTGGGAGAAATGCTCGGTTTCGCCAACTCTGGTGAGTGGGAAGGATTCCGGTCATCAAATCACCGGAATCAATGTAGGTGACAAGAAATCTGACGGAGTTGTTGTTGGTGTTCCGTTTTGGTGGAACTACCCTAACAATATTATTTGA 537 0.4823 MVISSRTLEITVISGENLRVMEDPYVVVRAESLNCCTTKMVKDSGSNNSSFYAWNEKFMMNVPMYARSITFEVQCNKFKGVRPVGVARIAVSDFLNDAVAENCLQVLSYRLRDWEGKRNGVIHFAVRVAAWEKCSVSPTLVSGKDSGHQITGINVGDKKSDGVVVGVPFWWNYPNNII* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1385 178 CDD C2_SRC2_like 7 124 IPR044750 GO:0006952
Apr10g1385 178 PANTHER INGRESSION PROTEIN FIC1 5 177 - -
Apr10g1385 178 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 128 IPR035892 -
Apr10g1385 178 Pfam C2 domain 7 102 IPR000008 -
Apr10g1385 178 Gene3D C2 domain 5 128 IPR035892 -
Apr10g1385 178 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 177 - -
Apr10g1385 178 SMART C2_3c 7 103 IPR000008 -
Apr10g1385 178 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1385 Apr-Chr10 26075588 26076698 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1385 - - gmx:102669378 224.942