Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1384 ATGGGGGTAAGCTCACGTACGCTAGAAATCACGGTGATATCAGGTGAAAACATTCTAGTAACGGAGGATCCATACGTCGTCGTTCGGGCTGAGTCTTTAAAATGCTGCACAACGAACATGGCCAAAGATAGTGGAAACAATAACTCCACTTTCTTTTCGTGGAATCAGAAGATAATGCTCAACGTGCCTGTGCATGCAAGATCCATCACATTCCAGGTTCAATCCAACAGGTTCAAGGCTGTTCGACCCGTTGGAGTCGCCAGAATCGCCGTTTCCGATTTTCTAAACGGCGTCGTGTCCCAAAACTGCTTCCAAGTGTTTAGTTACCGGTTGAGGGACTGGGAAGGGAAAAGAAATGGAATCATTCGCTTCGCAGTGAGGGTGGCGCCGCCGGAGGAATGTTTGAATTCCACTGTGGAGGCGGTGAAGGGAACGGTGGCGAGTAAGGAATCCGGTGATCAGTTCTTGGGAATCGGGATTGATGACAAGAACTCTTGTAACGAAGTTGCCGTTGGTGTTCCAATTTGGTGGAACTACCCTAGCGTTGTTTGA 552 0.4855 MGVSSRTLEITVISGENILVTEDPYVVVRAESLKCCTTNMAKDSGNNNSTFFSWNQKIMLNVPVHARSITFQVQSNRFKAVRPVGVARIAVSDFLNGVVSQNCFQVFSYRLRDWEGKRNGIIRFAVRVAPPEECLNSTVEAVKGTVASKESGDQFLGIGIDDKNSCNEVAVGVPIWWNYPSVV* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1384 183 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 132 IPR035892 -
Apr10g1384 183 Pfam C2 domain 7 102 IPR000008 -
Apr10g1384 183 SMART C2_3c 7 103 IPR000008 -
Apr10g1384 183 Gene3D C2 domain 5 130 IPR035892 -
Apr10g1384 183 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 180 - -
Apr10g1384 183 PANTHER INGRESSION PROTEIN FIC1 5 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1384 Apr-Chr10 26072717 26073493 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1384 - - gmx:102669378 241.121