Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr10g1383 | ATGGAAGCAAAACCACATGCACGCACCTTAGAGATCAACGTTATATCGGGAGAAAACATATGTGTCGATCAAAGTTCAGTGGTGGAAAACGTGTATGTTGTTGTTCGTGCCGAGTCTCTTAGTTGTTGCTCCACAAAAATGGTGAACAAAGATAAGGGTTTGCTTACGTGGGACGAGAAATTCTCGTTATATATTCCTTCCCATGCAAGGTCAGTGACGTTTGAGGTGCAATGCAAGAAGTACAGAGGGGTTCGTCCTATTGGGGTAGCAAGGATAGCACTTTCGGATTTTCTTGGTGACAATGTTGTGTCTAAAAGTTGTGTTCAAATGTTTAGTTATGGGTTGAGGGATTGGGATGGTCAACGAAATGGGGTTATTCATTTCTCCGTGAGGTGGGTGATGCAAGAGGATTACGCAAGCTTAGAAATGAAACCAAAGGAGGAAATAACCAATGTGAATTCTAGTGGGTTTGAGCCTGAGGTTAAGGGGTTTCAGGTGAACCCTAAGACTTCAAGTAACGTTGTCATTGGCATGCCAGTTTGGTACGTACGTTGA | 555 | 0.4324 | MEAKPHARTLEINVISGENICVDQSSVVENVYVVVRAESLSCCSTKMVNKDKGLLTWDEKFSLYIPSHARSVTFEVQCKKYRGVRPIGVARIALSDFLGDNVVSKSCVQMFSYGLRDWDGQRNGVIHFSVRWVMQEDYASLEMKPKEEITNVNSSGFEPEVKGFQVNPKTSSNVVIGMPVWYVR* | 185 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr10g1383 | 184 | PANTHER | C2 DOMAIN PROTEIN | 6 | 182 | - | - | |
| Apr10g1383 | 184 | Gene3D | C2 domain | 7 | 133 | IPR035892 | - | |
| Apr10g1383 | 184 | SMART | C2_3c | 9 | 106 | IPR000008 | - | |
| Apr10g1383 | 184 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Apr10g1383 | 184 | Pfam | C2 domain | 9 | 101 | IPR000008 | - | |
| Apr10g1383 | 184 | PANTHER | INGRESSION PROTEIN FIC1 | 6 | 182 | - | - | |
| Apr10g1383 | 184 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 9 | 148 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr10g1383 | Apr-Chr10 | 26063690 | 26064244 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr10g1383 | - | - | gmx:100810274 | 224.172 |