Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1382 ATGATTAAGGGAAGCAAAAGCAGAACACTAGAGGTAACGATTTTATCGGCGGAGGATCTCCGCATAAACGGAAAGGCGGCGAACAAGAACGTGTTCGTGGGTGTACGCGCCGACTCTCTGACGAGCCAAATGACAACAATGAAGGGCAATGGCGAAGGAGGGGGGTTCCACACGTGGAACGAGAAGTTCTTGGTGGAGTTGCGCGAGCGCGTGATGGATGTAACGTTCGAAGTGAAGAGCAAAACGGGAACGCGTGTGAAGGACGTTGGCGTGGCGAGAGTGGCGGTTAAGGATTTTCTTGGGGGGTCGGTTCCTAATCACTGCTTGCAGTTTCTGAGTTACCGGTTGAGGGATTGGGATGGCTTGCGAAACGGGATCATCAATTTTTCCGTTAGAGTTGTGGGGGCTGAAGAGGTTGTTGCTGGTTCTTGTGGGTCGCAGAAAGGTGCTCAGAGTGTTTCTTCCTGCGAAGGTGTTGTTACTGGCATTCCCGTTCGGTGGAACGCCTCAACTAGCATTAGTCAAGTTTGA 531 0.5179 MIKGSKSRTLEVTILSAEDLRINGKAANKNVFVGVRADSLTSQMTTMKGNGEGGGFHTWNEKFLVELRERVMDVTFEVKSKTGTRVKDVGVARVAVKDFLGGSVPNHCLQFLSYRLRDWDGLRNGIINFSVRVVGAEEVVAGSCGSQKGAQSVSSCEGVVTGIPVRWNASTSISQV* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1382 176 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 7 172 - -
Apr10g1382 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 139 IPR035892 -
Apr10g1382 176 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Apr10g1382 176 PANTHER INGRESSION PROTEIN FIC1 7 172 - -
Apr10g1382 176 CDD C2_SRC2_like 9 129 IPR044750 GO:0006952
Apr10g1382 176 SMART C2_3c 9 108 IPR000008 -
Apr10g1382 176 Gene3D C2 domain 7 133 IPR035892 -
Apr10g1382 176 Pfam C2 domain 9 107 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1382 Apr-Chr10 26057999 26058529 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1382 - - adu:107473351 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1382 10 26057999 26058529 Apr10g1382 10 26057999 26058529 ECH