Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1362 ATGGCACAAGCATTAACAGAAAGGTATGGTGTTGTGACAGGAGCAAATAAGGGAATTGGGTTTGCAATATGCAAACAATTGGCCTCTAATGGGATCAATGTGGTGCTAACAGCCAGAGATGAGAAAAGGGGTCTTGAAGCTGTTGACAAACTGAAAGAGCTTCCTCTCCCTGGCCATGTTGTTTTTCATCAACTTGATATTTCAGATCCTGCAAGTATAGAATCAATTGCAGATTTTATCAAGAACCAATATGGAAAACTCGATATCTTGGTAAACAATGCAGCAATTCCAGGAGCACAGTGGGACCCTGAGGCTCTGAATGAGGCAATTCTTAAGGAAAATCCTAGCCGTGATGATTGGAGCAAAATAGCAACTGAAACCTATGAATTAACAGAAGTAGGTCTTAAAACAAATTACTATGGAACCAAGGCTTTGACAGAAGCACTTATTCCCCTTCTCCAGTGTTCAGCCTCGCCAAATATTGTCAATGTCTCCTCATCCATGGGAAGGCTACAGAATATACCAAATGGATGGCCTAAAGAAGTACTAAGTGATGTTGAAAACCTTACAGAAGGAAAAATAGATGAAATTTTGAATGAATTTCTAAAGGATTCAAAAGAGGGTTCATCAGAAAACAAAGGATGGCCCTATGCTCTACCTACATATTGTGTCTCAAAAGCTGCTCTAAATGGCTACACAAGAATTCTAGCCAAGAAGTACCCTTCATTCTGCATCAATGCAGTTTGCCCTGGCTATGTGAAAACAGATATAAACTTCAATACCGGTTATCTAACACCTGATGAAGGTGCTGAAGCTGCTGTGAGGTTGGCATTGCTACCTCAAGGTAGTCCTTCTGGCCTCTTTTTCTCTCGGAGTGACGAGAAATCATTTTGA 894 0.4072 MAQALTERYGVVTGANKGIGFAICKQLASNGINVVLTARDEKRGLEAVDKLKELPLPGHVVFHQLDISDPASIESIADFIKNQYGKLDILVNNAAIPGAQWDPEALNEAILKENPSRDDWSKIATETYELTEVGLKTNYYGTKALTEALIPLLQCSASPNIVNVSSSMGRLQNIPNGWPKEVLSDVENLTEGKIDEILNEFLKDSKEGSSENKGWPYALPTYCVSKAALNGYTRILAKKYPSFCINAVCPGYVKTDINFNTGYLTPDEGAEAAVRLALLPQGSPSGLFFSRSDEKSF* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1362 297 PRINTS Glucose/ribitol dehydrogenase family signature 9 26 IPR002347 -
Apr10g1362 297 PRINTS Glucose/ribitol dehydrogenase family signature 85 96 IPR002347 -
Apr10g1362 297 PRINTS Glucose/ribitol dehydrogenase family signature 153 169 IPR002347 -
Apr10g1362 297 PRINTS Glucose/ribitol dehydrogenase family signature 222 241 IPR002347 -
Apr10g1362 297 PRINTS Glucose/ribitol dehydrogenase family signature 241 258 IPR002347 -
Apr10g1362 297 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 5 297 - -
Apr10g1362 297 Gene3D - 1 297 - -
Apr10g1362 297 Pfam short chain dehydrogenase 11 172 IPR002347 -
Apr10g1362 297 Pfam short chain dehydrogenase 218 258 IPR002347 -
Apr10g1362 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 283 IPR036291 -
Apr10g1362 297 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 209 237 IPR020904 GO:0016491
Apr10g1362 297 CDD carb_red_PTCR-like_SDR_c 8 297 IPR045313 GO:0016616
Apr10g1362 297 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 5 297 - -
Apr10g1362 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 IPR002347 -
Apr10g1362 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 167 IPR002347 -
Apr10g1362 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 222 241 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1362 Apr-Chr10 25920312 25924384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1362 11 274 Miscellaneous Gene Families AT2G29150 26.866 1.82e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1362 K15095 - gmx:100803877 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1362 10 25920312 25924384 Apr10g1362 10 25920312 25924384 ECH