Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1355 ATGAACAAGGACAACGAGGCATATCTGAAACTCTTCTGGGGTCGTTCTAATCTTCAGAAAACGTGTTTCTTGTCGAAGAAGACCAAAACCACAGCAATTGCCACCACATTGTTTGGGTTGTTTTGCTTCGTAGTCACTTTCTGTGCTTTTGCAGTATGGAATACGTCTACATTTGCAGGTTTTTCCATTCCAAACCAAAACCTCTCAATGATCCACATAGCCAAACCCCAAGAACAAGAAATTCCTCTTAGGTGCATCAAAGGGGAAAATGTGACACAAACATGCCCAAAAGACTACTACCCCACATCACATAAGCCCACTAGTAATCATAGCCGTACATGTCCCTCGTACTTCAAATGGATCCATGAAGATCTAAGGGCATGGAGAGAGAAAGGGATCACAAGAGAAATGTTGGAAGGTGCAAGAAGAACAGCACACTTTAGGATTGTGACTTTAGAGGGGAAGGTGTATGTGGAGAAGTATAGGCAATCAATTCAAACAAGAGATGTGTTTACTTTGTGGGGTATATTGCAACTCATGAGATTGTACCCTGGCAAATTGCCTGATTTGGAGCTTTTGTTTGATTGCGATGATAGGCCTGTTCTTCCAATGGAAAGGTTTAAAGGCCCAAATGCTGCACCACCACCTTTGTTTAGATATTGTTCAAATCAGTGGAGTTTGGATATTGTGTTCCCTGATTGGTCCTTTTGGGGATGGGAAGAGACAAATATAAAGCCATGGAAAAAAATTGTGGAAGATATTAAGAAAGGGAACAAGAAAACCAAGTGGAAGGACAGAGTACCATACGCCTATTGGAAGGGGAACCCTTATGTTGCTGCAACTAGAAAAAACCTTATGAAATGCAATGTCACACCAAAATATGACTCCAACACTCGCCTATACATACAGGACTGGATAAAAGAATCCGATGAAGGATACAAGAAATCCAACTTAGGGGACCAATGCACCCATAGGTATAAGATATACATAGAAGGATGGGCTTGGTCTGTTAGTGAGAAGTACATTTTGGCATGCGATGCTATGACTCTGTATGTTAAGCCTAATTTCTATGATTTTTTCGTCCGAGGCATGGTGCCATTACAGCACTATTGGCCCATTAGAGACAATAGCAAGTGCACCTCTCTTAAGTTTGCTGTGGAATGGGGCAATAACCACACTGATAAGGCACAAGCAATTGGGGAGGCTGCTAGCAAATTTATTCAAGAGGACTTGGACATGGATTATGTGTATGATTACATGTTTCATCTTCTAAATGAATATGCAAAGCTCCTAAGGTTCAAACCAACTATACCTTCAGGAGCTGTGGAGTTATGTCCAGAAACAATGGCATGTGCTTTAAATGGTACACAAAGGAGGTTCATGGAGGAGTCAATGGTGATGTTTCCTAGTGATTCAAATCCATGCACTATTCCACCTCCATATGATCCTATAACCCTACAACGCTTTCTAGATAATAAAGTTAATTCAACAAGACAGGTAGAAACTTGGGAAGATGAATATTGGGAGAATAAAAGGAAGGGACAATAG 1548 0.4096 MNKDNEAYLKLFWGRSNLQKTCFLSKKTKTTAIATTLFGLFCFVVTFCAFAVWNTSTFAGFSIPNQNLSMIHIAKPQEQEIPLRCIKGENVTQTCPKDYYPTSHKPTSNHSRTCPSYFKWIHEDLRAWREKGITREMLEGARRTAHFRIVTLEGKVYVEKYRQSIQTRDVFTLWGILQLMRLYPGKLPDLELLFDCDDRPVLPMERFKGPNAAPPPLFRYCSNQWSLDIVFPDWSFWGWEETNIKPWKKIVEDIKKGNKKTKWKDRVPYAYWKGNPYVAATRKNLMKCNVTPKYDSNTRLYIQDWIKESDEGYKKSNLGDQCTHRYKIYIEGWAWSVSEKYILACDAMTLYVKPNFYDFFVRGMVPLQHYWPIRDNSKCTSLKFAVEWGNNHTDKAQAIGEAASKFIQEDLDMDYVYDYMFHLLNEYAKLLRFKPTIPSGAVELCPETMACALNGTQRRFMEESMVMFPSDSNPCTIPPPYDPITLQRFLDNKVNSTRQVETWEDEYWENKRKGQ* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1355 515 PANTHER GLYCOSYLTRANSFERASE 24 511 - -
Apr10g1355 515 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 24 511 - -
Apr10g1355 515 Pfam Glycosyl transferase family 90 110 504 IPR006598 -
Apr10g1355 515 SMART cap10 186 434 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1355 Apr-Chr10 25860998 25865193 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1355 - - gmx:100790123 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1355 10 25860998 25865193 Apr10g1355 10 25860998 25865193 ECH