Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1347 ATGAGCAATCTCAAATTATGTGTAGAAGTTGTGGGTGCTCATGACCTTATGCCCAAAGACGGGCAGGGCTCATGTAGTGCTTATGTGGAACTTCACTTTGATGGTCAGAAATTTCGGACAACAACCAGAGAGAAAGATTTGAATCCTGTTTGGAATGAGAAATTTTACTTCAAGGTTACTGATCCAAGCCAATTACCAAACCTCACTCTTGATGCTTGTATCTACCACTATAGCAAAAGCAGTAGTTCCAAAGTCTTTCTTGGTAAGGTCCACCTCACTGGTCCCTCATTTGTCCCATATTCTGATGCTGTTTTTCTGCAATACCCTGTGGAGAAGAAAAATGTTTTTTCCCGTGTAAAAGGAGAGCTGGGTTTAAAGGTATATATTACTGATGATCCTTCAATAAGATCGTCAAACCCTCTCCATGATGTAGAACCCTCTGTGGACACAGATCAACACTCAACCCAAGATCAGTCACCAGTTTCATTCACAAGTTCGATCCTAAATATGTTTTCTCGCAAGAAAAATGAGACAAGGCACACATTTCATAACCTTCCTGATTCAAATCAACGAAAACATGAGGAACCTTCTCCCTCAGCGGCTGCGAAAACAAGTAAAAACTATGGGACGCATGAGATTAAATCTGGACTGCCTCCTCCAAAAGTTGTGCATGCATATTCACCATATCCTATGGATTATGCACTCAAAGAGACAAGCCCTTTTCTTGGAGGGGGACAAGTACTTGGAGGGCGAGTTAAACGTGGGTACGGGCCAGTCAGCACCTATGACCTTGTTGAACCAATGCAGTACCTCTTTGTACGAGTTGTACGAGCTCGTGACCTTCCATCAAAGGGTGTGACTGGTGGCCTCGATCCATATGTGGAGGTAAAGGTTGGAAACTTCAAGGGAACTACTAAACACCATGAGAAAACTCAAGATCCTGAATGGAATCAGGTGTTTGCCTTTGCAAGGGAAAATCAGCAGGCAACTACGCTTGAAGTTATGGTCAAAGACAAGAATATGTTATTAGATGAAGTAGTTGGCATTGTGAGGTTTGATCTCCATGATGTTCCTACACGGGTTCCACCGAACAGTCCCTTGGCTCCTGAATGGTATCGGATTGACAAGGGTAAGGACAAGAAAAAAGGGGAGTTGATGCTTGCTGTATGGTTTGGAACACAAGCTGATGAAGCTTTTCCTGATGCTTGGCATTCTGATGCACTGTCTCCCAATGACAGCTCTTCATCTGCATATAATCAGATTCGATCAAAAGTTTACCATTCACCAAGGTTATGGTATGTACGGGTTAAAGTGTTTGAGGCACAGGACTTAGTTGTATCAGAGAAGTCCCGAATCCAAGATGCCTATGTTAAGTTACAGATTGGTAACCAGATTTTGAAGACAAGGCCAGTTCAATCAAGGACCATGAACCTGCGTTGGGATCAGGAGCTGATGTTTGTTGCTGCCGAGCCCTTTGAAGAACCTTTGGTTGTTTCAATTGAAAATAGAGTTGGTCCCAACAAGGATGAGACTATTGGAGTTGTTGTTATTCCTTTAACCCACGCTGATAAACGAGCTGATGATAGAAGTACCCATACTAGGTGGTATAACCTTGAAGAATCCATGTCATCTGCTATGGATGCAGAACAAGGGAAAAAGGAGAAAGATAAATTTTTTAGTAGAATTCACCTCAGTGTCTGTCTTGATGGTGGGTATCATGTTTTTGATGGGTCAACTTATTATAGCAGTGATCTTAGACCCACATCAAAGCAGCTCTGGAAGAAGTCCATTGGTATCTTAGAACTTGGGATTCTAAGTGTTGATGGACTTCATCCAATGAAAACCAGGGATGGAAGGGGTGCAACGGATACATACTGTGTGGCAAAATATGGGCAGAAATGGGTTCGCACTCGAACCATCAGTAATAGTCCAAGCCCAAAATACAATGAGCAATACACTTGGGAAGTTTTTGATCCAGCTACAGTTCTCACTGTGGGAGTGTTTGATAATGGACAGCTTCATAATTCAGATGGTAACATAGATCTAAAAGTTGGTAAAGTTCGGATCCGGATCTCAACCCTGGAAACTGGCCGTGTTTACACAAATGCTTACCCATTACTAGTGCTTCATCCTTCAGGTGTCAAGAAGATGGGTGAACTGCACTTGGCCATTAGATTCTCCTGTGCCTCAATGGTTGACTTGATGCAATTGTATTTCAAGCCTCCCTTACCAAAAATGCACTATAAAAGGCCACTTAACTTAATAGAACAGGAAAAACTGCGACACCAAGCCGTCAATGTTGTTGCTGCGCGTCTTAGTAGGGCTGAACCCCCGCTTAGAAAGGAGGTAGTTGAGTACATGTGTGATACAGAATCTCATCTGTGGAGCATGAGACGTAGCAAGGCGAATTTCTACCGTCTGATGACAGTGTTCTCAGGAATTTTTTCAGTTGGAAGATGGTTGGGAGAAGTTTCCACATGGAAGCATCCTGTCACAACAGTGCTGGTGCACATTCTTTTTCTGATGCTTGTGTGTTTCCCTGAACTTATTTTCCCTACCGTGTTTCTATACATGTTTGTCATTGGTATGTGGAATTGGAGGTTCCGCCCGAGGTACCCCCCTCACATGAACACTAGACTCTCCTATGCTGAAGGAGTTACCCCAGATGAGCTTGATGAGGAGTTTGACACATTTCCTACATCAAAGGGCCCTGACGTTGTACGGTGGAGGTATGATCGGTTAAGAAGCGTGGCTGGGAGGATTCAGAGTGTTGTTGGAGATTTAGCTACTCAAGGAGAGAGGATCCAAGCTCTAGTGAACTGGCGTGATCCTCGTGCCACCACCATGTTCATGGCATTCTGCTTTGTGGCTGCTATTGTGTTGTATGTGACACCCTTTCAGCTGCCTATTCTTCTGACCGGATTTTACTTAATGAGGCACCCAATGCTTCGGAGTAAGGTGCCGGCAGCTCCGGTTAACTTCTTCCGCAGGTTGCCTGCCCTTACAGATAGCATGCTGTAA 3021 0.4389 MSNLKLCVEVVGAHDLMPKDGQGSCSAYVELHFDGQKFRTTTREKDLNPVWNEKFYFKVTDPSQLPNLTLDACIYHYSKSSSSKVFLGKVHLTGPSFVPYSDAVFLQYPVEKKNVFSRVKGELGLKVYITDDPSIRSSNPLHDVEPSVDTDQHSTQDQSPVSFTSSILNMFSRKKNETRHTFHNLPDSNQRKHEEPSPSAAAKTSKNYGTHEIKSGLPPPKVVHAYSPYPMDYALKETSPFLGGGQVLGGRVKRGYGPVSTYDLVEPMQYLFVRVVRARDLPSKGVTGGLDPYVEVKVGNFKGTTKHHEKTQDPEWNQVFAFARENQQATTLEVMVKDKNMLLDEVVGIVRFDLHDVPTRVPPNSPLAPEWYRIDKGKDKKKGELMLAVWFGTQADEAFPDAWHSDALSPNDSSSSAYNQIRSKVYHSPRLWYVRVKVFEAQDLVVSEKSRIQDAYVKLQIGNQILKTRPVQSRTMNLRWDQELMFVAAEPFEEPLVVSIENRVGPNKDETIGVVVIPLTHADKRADDRSTHTRWYNLEESMSSAMDAEQGKKEKDKFFSRIHLSVCLDGGYHVFDGSTYYSSDLRPTSKQLWKKSIGILELGILSVDGLHPMKTRDGRGATDTYCVAKYGQKWVRTRTISNSPSPKYNEQYTWEVFDPATVLTVGVFDNGQLHNSDGNIDLKVGKVRIRISTLETGRVYTNAYPLLVLHPSGVKKMGELHLAIRFSCASMVDLMQLYFKPPLPKMHYKRPLNLIEQEKLRHQAVNVVAARLSRAEPPLRKEVVEYMCDTESHLWSMRRSKANFYRLMTVFSGIFSVGRWLGEVSTWKHPVTTVLVHILFLMLVCFPELIFPTVFLYMFVIGMWNWRFRPRYPPHMNTRLSYAEGVTPDELDEEFDTFPTSKGPDVVRWRYDRLRSVAGRIQSVVGDLATQGERIQALVNWRDPRATTMFMAFCFVAAIVLYVTPFQLPILLTGFYLMRHPMLRSKVPAAPVNFFRRLPALTDSML* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1347 1006 MobiDBLite consensus disorder prediction 179 199 - -
Apr10g1347 1006 CDD C2A_MCTP_PRT_plant 5 131 - -
Apr10g1347 1006 CDD C2C_MCTP_PRT_plant 433 587 - -
Apr10g1347 1006 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 432 589 IPR035892 -
Apr10g1347 1006 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 133 IPR035892 -
Apr10g1347 1006 ProSiteProfiles C2 domain profile. 412 536 IPR000008 -
Apr10g1347 1006 Pfam Plant phosphoribosyltransferase C-terminal 852 1006 IPR013583 -
Apr10g1347 1006 CDD C2D_MCTP_PRT_plant 599 723 - -
Apr10g1347 1006 ProSiteProfiles C2 domain profile. 252 372 IPR000008 -
Apr10g1347 1006 Pfam C2 domain 598 706 IPR000008 -
Apr10g1347 1006 Pfam C2 domain 270 362 IPR000008 -
Apr10g1347 1006 Pfam C2 domain 432 538 IPR000008 -
Apr10g1347 1006 Pfam C2 domain 5 92 IPR000008 -
Apr10g1347 1006 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 270 408 IPR035892 -
Apr10g1347 1006 MobiDBLite consensus disorder prediction 136 160 - -
Apr10g1347 1006 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 1 1006 - -
Apr10g1347 1006 Gene3D C2 domain 2 160 IPR035892 -
Apr10g1347 1006 ProSiteProfiles C2 domain profile. 581 704 IPR000008 -
Apr10g1347 1006 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 1 1006 - -
Apr10g1347 1006 SMART C2_3c 433 531 IPR000008 -
Apr10g1347 1006 SMART C2_3c 5 105 IPR000008 -
Apr10g1347 1006 SMART C2_3c 270 366 IPR000008 -
Apr10g1347 1006 SMART C2_3c 599 703 IPR000008 -
Apr10g1347 1006 Gene3D C2 domain 258 392 IPR035892 -
Apr10g1347 1006 Gene3D C2 domain 583 728 IPR035892 -
Apr10g1347 1006 Gene3D C2 domain 417 566 IPR035892 -
Apr10g1347 1006 CDD C2B_MCTP_PRT_plant 270 393 - -
Apr10g1347 1006 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Apr10g1347 1006 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 598 738 IPR035892 -
Apr10g1347 1006 MobiDBLite consensus disorder prediction 179 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1347 Apr-Chr10 25786454 25791886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1347 1 1006 Lipid Metabolism Gene Families AT4G00700 57.101 0.0 1151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1347 - - gmx:100800326 1803.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1347 10 25786454 25791886 Apr10g1347 10 25786454 25791886 ECH