Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1339 ATGGAGCAAATGGATGATGTAAAAGAATCATCAAATGATGTCAGTGAAGTAGAAGTCACTAATGCTTCACTTATTCCTGGCCTTCCAGATGATATTTCTCTTATGTGCTTGGCAAGAATTCATAGAAAATATCATTCAGTCCTGAAGTGTGTCTCAAAAAGATGGAGGGACTTAGTTTGCGGGCAAGAGTGGCACTGTTATCGCCAAAAGCATAAACTTGATGAGACCTGGATCTATGCTTTGTGCAGGGACAAATTTGATCAAATTTGTTGTTATGTTTTGGATCCTACCTCATCAAGAAGATGTTGGAAGCCCGTTCATGGGCTTCCACCTCACATCATGAAAAGAAAAGGCATGGGTTTTGAAGCTTTGGGAAATAAGCTATTCTTATTGGGTGGCTGTAGCTGGTTAGAAGATGCTACTGATGAGGTCTATTCATATGATGCTTCCATGAACACTTGGGTTGAAGCTGCTTCCATGTCAACTGCTAGGTGCTACTTTGCTTGCGAAGTTTTGGATGAAAAACTATATGCTATTGGTGGGATAGTTTCTAATTCAAGTGATCCTCATTCCTGGGATACTTACGACCCTCAGACAAATTGTTGGAAATCTCATAGAGATCCTAATATTGTTTCTGACATTGAAGATTCAGTAGTAGTCGATGGCAAGATATACATCCGATGTGGCAAATCTCCTGTCACTCCTCCTGTATATGCTGTTTATGAACCATCAAGTGGCACATGGAAGCATGTAGATACTGACTTGGTGTTAGAATGGAGAGGTCCTGCAGTTGTTGTTCATGAGAACCTTTTTCATTTGGATCAGAGTATGGGAGCTAAGTTGATGATGTGGCATAAAGATAGATGTGAATGGATACCCATTGGAAAGCTATCACCATTGCTTACAAGACCACCTTGCCATCTTGTTGCAGTTGGTACAAGAATTTTTGTTATTGGGAAAGGGCTTAGCACTGTGGTTATTGATGTTGGTGATTTGGGAAATCTGGGAGGGATGATTATAGGTTCTTCTATACCCGGATTATTATATGATTTCAGTGTAATTAGTTGTAAATGCTTGTCGATCTGA 1086 0.4006 MEQMDDVKESSNDVSEVEVTNASLIPGLPDDISLMCLARIHRKYHSVLKCVSKRWRDLVCGQEWHCYRQKHKLDETWIYALCRDKFDQICCYVLDPTSSRRCWKPVHGLPPHIMKRKGMGFEALGNKLFLLGGCSWLEDATDEVYSYDASMNTWVEAASMSTARCYFACEVLDEKLYAIGGIVSNSSDPHSWDTYDPQTNCWKSHRDPNIVSDIEDSVVVDGKIYIRCGKSPVTPPVYAVYEPSSGTWKHVDTDLVLEWRGPAVVVHENLFHLDQSMGAKLMMWHKDRCEWIPIGKLSPLLTRPPCHLVAVGTRIFVIGKGLSTVVIDVGDLGNLGGMIIGSSIPGLLYDFSVISCKCLSI* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1339 361 SUPERFAMILY F-box domain 24 103 IPR036047 GO:0005515
Apr10g1339 361 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 15 335 - -
Apr10g1339 361 Pfam Kelch motif 116 161 IPR006652 GO:0005515
Apr10g1339 361 Pfam Kelch motif 163 203 IPR006652 GO:0005515
Apr10g1339 361 Pfam F-box domain 27 66 IPR001810 GO:0005515
Apr10g1339 361 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 15 335 - -
Apr10g1339 361 SUPERFAMILY Kelch motif 82 322 IPR015915 GO:0005515
Apr10g1339 361 Gene3D - 84 330 IPR015915 GO:0005515
Apr10g1339 361 SMART kelc_smart 127 174 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1339 Apr-Chr10 25721434 25724535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1339 28 272 Miscellaneous Gene Families AT4G33900 25.940 1.20e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1339 - - gmx:100798211 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1339 10 25721434 25724535 Apr10g1339 10 25721434 25724535 ECH