Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1336 ATGTCATTTATCTGTGGAGTTCCTATACTTGAGTGTGTTTATTGTCTGGCCTGTACTCGTTGGGCTTGGAAAAAATGTCTATACACTGCAGGCTATGAGAGTGAAAATTGGGGTCTTGCTACTGCTGAAGATTTTGAGCCTGTACCTCGAATTTGTAGGCTAATCTTAGCTGTTTACGAAGAGGATATTCGTAACCCCCAATGGGCTCCTCAAGGAGGTTATGGCATTAATCCTGATTGGGTTATCTTGCGTAAGGACTACGAGGATAACCAAGGTCATGTTACTCCATACATGATATACCTTGATCATGATCATGCTGAAATTATACTGGCTGTTAGTGGACTCAATTTGGCAAAGGAAAGTGATTATTTAGTTTTGCTTGATAACAAGCTGGGGCAGGCAGAATTTCATGGTGGTTATGTTCATAATGGGTTGTTGAAGGCAGCAGGATGGGTTTTTGATGCAGAACATGAGGTTCTTAGGGAGCTGGTGGCAGAAAATCCAACTTATATGTTGATATTTACCGGGCATTCTCTTGGAGCTGGGGTGGTGGCACTGTTGACAATGCTAGCGCTTCATAATCGAGATAAATTAGGAATACAAAGAAACAAGATACGATGCTTTGCAATAGCTCCTACCCGATGCATGTCTCTGAATTTGGCTGTAAGATATGCGGATGTGATCAATTCTGTTGTGCTCCAGGATGACTTTTTGCCTCGGACAACCACTGCTCTAGAAGATGTCTTCAAGTCACTTCTATGTTGGCCCTGCTTATTGTGTATAATGTGCTTAAAGGATACTTGCACACTGGAGGAGAAGAAGCTTAGAGATCCAAGGCGTCTATATGCACCTGGTCGTCTCTATCACATTGTGGAGCGAAAGCCCTTCAGGATAGGAAGATTTCCACCTGTAGTTAGGACAGCAGTACCTGTTGATGGGAGGTTTGATCATATAGTTCTTTCTTGCAATGCAACTTCTGACCATGCCATCATTTGGATAGAGAGAGAATCCCGATGGGCTCTCAATTTAATGCTAGATAAAGATCAGCATATGGAGATTCCAGCAGAGCAAAGGATGGAGAGGCATGAAAGTCTAGCTCGAGAACACAGCGAAGAGCACCGTGCAGCCCTCCAGAGGGCAGTTGCTTTGGATATTCCTCAAGCATACTCACCTTCCTCATATGGAACATTTCATGAAATGGATGTTGGTGAGGATTCTGGAAGATCAAGTGAAAAAGTGTCCTCCTTATCTTCTAAGAAACGAACACAAAGTTGGAATGAATTTGTTGGGCGGCTGTTTGATGTGGATGACTCAGGTCATATGGTGTTCAAGAAGACAAATCCATAA 1347 0.4306 MSFICGVPILECVYCLACTRWAWKKCLYTAGYESENWGLATAEDFEPVPRICRLILAVYEEDIRNPQWAPQGGYGINPDWVILRKDYEDNQGHVTPYMIYLDHDHAEIILAVSGLNLAKESDYLVLLDNKLGQAEFHGGYVHNGLLKAAGWVFDAEHEVLRELVAENPTYMLIFTGHSLGAGVVALLTMLALHNRDKLGIQRNKIRCFAIAPTRCMSLNLAVRYADVINSVVLQDDFLPRTTTALEDVFKSLLCWPCLLCIMCLKDTCTLEEKKLRDPRRLYAPGRLYHIVERKPFRIGRFPPVVRTAVPVDGRFDHIVLSCNATSDHAIIWIERESRWALNLMLDKDQHMEIPAEQRMERHESLAREHSEEHRAALQRAVALDIPQAYSPSSYGTFHEMDVGEDSGRSSEKVSSLSSKKRTQSWNEFVGRLFDVDDSGHMVFKKTNP* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1336 448 CDD Lipase_3 44 240 - -
Apr10g1336 448 Gene3D alpha/beta hydrolase 39 251 IPR029058 -
Apr10g1336 448 Coils Coil 359 379 - -
Apr10g1336 448 Pfam Lipase 3 N-terminal region 10 74 IPR005592 GO:0016042
Apr10g1336 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Apr10g1336 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Apr10g1336 448 Pfam Lipase (class 3) 119 243 IPR002921 GO:0006629
Apr10g1336 448 MobiDBLite consensus disorder prediction 401 422 - -
Apr10g1336 448 SUPERFAMILY alpha/beta-Hydrolases 41 251 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1336 Apr-Chr10 25695789 25700936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1336 1 447 Miscellaneous Gene Families AT3G49050 61.814 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1336 - - gmx:100800227 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1336 10 25695789 25700936 Apr10g1336 10 25695789 25700936 ECH