Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1329 ATGCAAAGGTATCATGCTGGCAGCTGCACTAGTGCAGTTAATAACAGTACAATAGGTGGGCCATCTGCTAGAGACACTGGAAGATCTGATTCACCTTCTTTGCCAGCTAACTTCTCTGTAAGTTCAAGGCGACAACCACCGCTAAACCCATACAAGTTGAAGTGTGATAAAGAACCCTTGAACTCTAGGCTTGGGGCACCAGACTTTCATCCCCAAACACCAACTTGTCCAGAGGAGACTCTAACAAGAGAATATTTGCAATCTGGATACAGGGATGCAGTTGAGGGACTTGAGGAAGCTAGAGAAATTTCGCTGACCCAGGTTCCACATTTTAACAAGGCAGTTGTTCTTAATTGCAAAGAGGCCATTAGAAAATGTCTTAGGGCCATCAATGAATCTCGTGCTCAGAAGAGGAAGGCTGGCCAAGTGTATGGTGTGGCTCTTTCAGGATCACAACTTGCTAGGTCTGGCGTTTTCCCTGAACTAAGACCCAGTGGTGAGGACTTCCGGAAGAAATGGATTGAGGGCTTATCACAACAGCACAAGCGATTACGCTCGTTGGCTGATCATGTTCCTCATGGTTATAAAAGGGCATCACTTTTAGAGGTTCTTATCAGGAATAATGTTCCATTGCTCAGAGCCACCTGGTTTATCAAGGTTACTTACCTCAATCAGGTTCGACCTGGTTCTGTTGGTATATCTTCTGGGACTGCTGACAAAATTCAGCTGTCTCGCTCTGAGGTTTGGACCAAAGATGTTATCAATTACTTGCAAACTCTTCTGGATGAATTTTTCTCAAAGAATACTTCTCATTCTACTCCTCATAGTCGAGAACGATCACCACAAGTGCCTTATACTGGATCTCTTCAGCATAAAAGTGATCCATTCTTATCAGTTTCTGATGGTGAAGATCCATCCTTACATTTTAGATGGTGGTATATGGTGCGGCTTCTGCAATGGCATCATGGTGAAGGGTTGCTTCTTTCTTCTCTTGTCATTGATTGGGTGTTGAATCAACTACAGGAAAAGGAACTGCTTGAGGTTTGGCAGCTGTTATTGCCTATTATATATGGTTTTTTAGAAACTATTGTTCTATCTCAAACTTATGTGCGCACTCTTGCTGGATTAGCTCTCCAAGTCATTCGTGATCCTGCTCCAGGTGGTTCAGATCTAGTTGATAATTCCAGGAGGGCATATACAACTTATGCTCTGATTGAAATGCTCCGGTATTTGATACTTGTGGTGCCAGATACTTTTGTTGCTTTGGATTACTTTCCTTTACCATCCTCCATAGTTTCACATTCAATGAATGATGGGAGTTTTGTACTAAAGTCAACTGAATCGTCAGGGAGGATAAAAAATAGTTCAGATGATTTTGGTAAAATTATTTCATGCATTCAGAGACATACAGAAGATCTTGCAAAGGCTGCAAACCCAGGCTATCCAGGTCATTGTCTGGCTAAAGTTGCAAAGGCCTTAGATAAATCTCTTGTGCTGGGTGATTTACGCATGGCATATAAATTTCTTTTTGAAGATCTTTTTGGTGGAACTGTATCTGAAGGTTGGGTTGCAAAAGTCAGCCCTTGCTTAAGGTTATCTCTGAAATGGTTTGGGACTGTAAATACACCCCTTATATATTCAGTATTTTTCCTTTGTGAGTGGGCAACGTGTGATTTCCGGGATTTTCGTTCTACTCCTCCTCACGACATAAAGTTTACAGGTAGGAAAGATCTTTCCCAAGTGCATATAGCTGTTAGACTTTTAAAGATGAATATGAGAGATGCAAAAATTTCATTTAAACAAACAAATGAGAGAATTCAAAGAGCTGGTCATTTTTCAAAAAATTCAAGTCAACGGCATAATTGGAATTATGTGGGTAATGTATCCAAATTGAAATCTAGTTCAAAATGTGTGGACCAGAGTACCAGTCCTTCAGTTATATTTGAAAGCCCGGGTCCTCTCCATGATATTATAGTTTGTTGGATTGATCAGCATGTGGTGCACAGAGGGGAAGGTCCCAAGCGCCTACATCTATTTATAGTGGAACTCATAAGTGCAGGCATCTTTTACCCCTTGGCATATGTACGGCAGCTGATAGTGAGTGGGATCATGGATATGAATGTCAATGCTGTTGACCTGGAGCGACAGAAGAGACACTATCGCATCTTAAAGCAGCTACCTGGACGCTTTGTCCATGATGCTTTGGAGGAATTAGGGATTGTTGAAGGGCCACAGCTCAAAGAAGCCTTGCAAATTTACTTGAATGAACGCCGCCTCATACTTCGTGGTCCTTTGAGTCAGTCCCATGATGATGCCAGTGGTGCCAATTTATCTGCTTCGAAGCAAAAGCAATATCCAGCTTCTACAAAGGGTGGAGTTTTGAAAGTGCCAATTGATCAGAGAAGAACTGCTATTTCTAACACAATATCTTCAAAAAATGCAAAGGATGATGCTAACGTTGAAGAACTAAAAACAGCCATCTCAGTACTGCTACAGCTACCTAATTGTTTATCTAATTTAAGCACTACAGGCTCTGATGAATCTGAAGGCAATGTTAGGAAACCTATCTGGTCTCATTACAGCAAGATTGATTCTGTGGAGGCTACACCTGGGTGTGAAGAATGTAGCAGAGCAAAGAGACAAAGGTTAAACGAGGAAAGAAGCTCATTTGTTCAAGGGCATTCTCCAGTTCATTCCGATGATGATGATACATGGTGGGTGAAGAAGGGAATGAAATCCTCGGAGCCTCTCAAAGTTGATCAACCACAAAAGTCAACCAAGCAGGTGACTAAGAGTCGACAAAAGAATGTCCGTAAAACTCAGAGTCTTGCTCAGCTGGCAGCTTCTAGAATTGAGGGTAGCCAAGGGGCGTCAACTAGTCATGTGTGTGATAACAAGGTAAGCTGTCCTCACCATAGATCTGCTACAGATGGAGATGGGCTGAGGTCTGTGGATAGCATACGAACAAGTAATTATGGGGATGTAGTTTCCATTGGAAAAGCACTAAAGCAGCTTCGCTTTGTTGAGAAAAGAGCAATAGCAGTTTGGCTGTTGACTGTGGTCAGGCAGGTAGTTGAAGAGAGAGAGAAAAATCTTGGTAAAACTGGTCAGTTTGGCAGGCCTTTTTCCATGGTGGAGGATAGAAGCTCAATACGGTGGAAACTTGGTGAGGATGAACTTTCAACAATACTTTATTTGATGGATATTTCTGATGATTTGGTATCAGCTGTCAAGTTCCTCCTTTGGTTGCTACCAAAGGTTCTTAATAGCCCCAATTCTACAATTCATAGTGGGAGGAATGTTTTGATGCTGCCAAGGAATGCGGAAAACCAAGTTTGTGATGTGGGAGAAGCATTTCTGCTATCATCACTAAGAAGGTATGAGAACATTCTTGTTGCAGCAGACCTTATTCCTGAAGCTTTGTCATCTGCAATGCATCGTGCTGGCACTATTATTGCATCTAATGGAAGGGTTTCAGGTTCAGGATCTCTAGCTTTTGCTCGGTATTTATTTAAAAAATACAGCAATGTGGCTAGTGTCATTGAGTGGGAGAAAACATTTAAGACTACATGTGATGCAAGACTTTCCTCTGAACTTGAGTCTGGTAGAGTGGATGGAGAGATAGGGTTGCCCTTAGGAGTTCCAGCTGGAATTGAGGACCCTGATGATTTTTTCCGTCAGAAGATAAGTGGCGGTCGGTTGCCATCCAGAGTTGGTGCAGGCATGAGGGACATAGTGCAGCGTAATGTTGAAGATGCATTCCCCTATCTTTTTGGAAAGGATAGAAAGATTTTTGCTGCTGGTACACCAAAAGGTCCTGCTTTAGAAAAATGGGATAGTGTATATCAAATTGCTCAAAAAATAGTTATGGGTCTGATTGATTGCATAAGGCAGACTGGTGGGGCTGCTCAGGAAGGAGATCCCTCTTTGGTCTCATCTGCTGTTTCTGCAATTGTTGTTAGTGTTGGTCCAACTTTAGCAAAAATGCCTGATTTTTCATCTGGCAATAATCATTCAAATATAATGTCAGGTACAAGTTCATTGAATTATGCTGGATGCATTCTGCGAATGCATATAACCTGTCTCTGCCTGCTTAAGGAAGCCCTAGGAGAACGCCAAAGCCGTGTATTTGATATTGCTCTTGCAGCTGAAGCTTCTAATGCTCTTGCTGGTGTTTTTACACCAAGTAAAGCATCTCGAGCTCAGTTTCAGATGTCTCCTGAAGCCCATGATACTAGTAACTCTATTTCAAATGATATAGGAAGCAACCCTAATAAAGTTGTGGTTGCAAAAGCAACAAAAATTGCTGCTTCTGTTTCTGCCCTTCTTGTTGGTGCAATTTTATATGGTGTTACCGGCCTGGAAAGAATGGTAACCGTTCTCAGATTAAAGGAGGGGCTAGATGTGGTACAATTTTTAAGAAGCACAAGATCCAATTCAAATGGAAATGCTCGTTCAGTTATGGCTTTTAAGGCAGATAGTTCAATTGAAGTTCATGTCCATTGGTTTAGATTGCTTGTTGGAAACTGCAGAACAATCTGTGAAGGGTTAGTGGCAGAACTCTTGGGTGAGCCATCTATTATGGCTCTTTCAAGGATGCAACGTATGCTTCCTCTAAACTTGGTCTTTCCTCCTGCCTATTCAATATTTGCCTTTGTTAAATGGCGGCCCTTCATTCAGAATGCTAATGTCACAGTTCGTGAAGACATAAATCAACTTTACCAGTCTCTAACAATGGCCATAACTGATGCTATAAAACATTTGCCTTTTCGAGATGTATGTTTTAGAGACTGTCAGGGTCTGTATGATCTTATGGCTGCAAATGGAAGTGATTCTGAATTTGCAACCTTGCTCGAGTTGAATGGTTCTGATATGCATTTAAAATCTACGGCATTTGTTCCTCTACGCTCCAGGCTTTTTCTAAATGCCATGATTGATTGTAAGATGCCACAATCTGTTTATTCAAAAGATGATGGGAGCCGGATTTCTGGACCTGGTGAATCTAAAATTAAGTTCACAGATCGTGAGTCTAAGCTTCAGGATATGCTTGTGCATGTTTTGGATACCATGCAACCTGCCAAATTTCACTGGCAGTGGGTCACACTCAGGTTGCTTTTAAATGAACAAGCCCTCATTGAAAAACTGGAGTCTCATGATATGTCTTTAGCTGATGCTATACAGTTGTCCTCACCTAGTCCAGAGAAGGCTGCTGCTGCTTCTGAGAACGAGAACAATTTCATTCAAATACTTCTCACAAGGTTGCTGGTTAGACCTGATGCTGCTCCCCTTTTCTCAGAGTTGATTCATCTCTTTGGTAGGTCACTAGAGGATTCAATGTTGTTGCAAGCTAAATGGTTCCTTGGAGGTCAGGATGTTCTCTTTGGTCGGAAGACCATCAGACAAAGACTACATAACATTGCTGAGAGTAAAGGACTCTCTGTTAAGGCCCAATTTTGGGAGCCATGGGGTTGGTGTAGTCCATGTACTGATCAAGGGACTATCAAAGGGGATAAAAAGAAGTTTGATACTGCATCTCTTGAGGAAGGAGAAGTTGTTGAAGAGGGAATGGATTTGAAAAGGTGCCTCAGAGGGTTATCTCAAGTGTCTGACACTGAAAACTCAAGCTGTAACCAGCAGCAAGTGACTGAAAGGGCTCTTATTGAGTTACTTCTTCCTTGCATAGATCAAAGCTCTGACGAATCCCGCAATTCCTTTGCAAATGATTTGGTGAAACAGCTAAGTTATATTGAGCAACAAATAACTGCTGTTACTGGTGGAAGTAAGGCAGTGGGAGCTGCTCCTCCCGGTGTGGAAGGTCAGACAAATAAAGTAAATAATCGCAAAACTATGAGAGGTGGAAGCCCTGGATTAGCTAGACGACCAACAATGGCAGCAGATTCTTCCCCACCATCTCCAGCAGCCCTTCGAGCTTCTATGTCATTACGTTTGCAGTTACTCCTGAGATTTCTTCCTATTCTTTGCACTGACAGGGAGCCGTCTGTGCGAAGCATGAGACAAAACCTTGCCTCTGTAATTCTTCGTCTACTTGGTAGCAGGGTTGTGCATGAGGATGCAGACATTTCGGTGAATCCTGTGCCATCTCTGCTGAGGAGGGAGGTGGAGTCATCTTCTGATGTTGCTTCTACTGCATGTGTGGATTCTTCTTCTAGGGGTCTGTTTGATCGTTTGTTTTTGGTTTTGCACGGGTTGTTAAGTAGTTATCCTCCAAGTTGGCTTAGGCTGAAGCCTATTACAAAGACGAGCAACGAACCTACTAGGGAAATTTCTGTAATTGACCGAGAATTATTGGAGACTTTGCAGAATGACTTGGACCGTATGCAACTGCCAGACACTATACGGTGGCATATCCAAGCTGCAATGCCCATACTCTTTCCCTCTATGCGGTGCTCCTTATCCTGCCAGCCACCAACTGTGTCAAACAGTGCTCTTGTTTGTTTTCAACCCAGCAATACAAATCCTGGGATTAACTCCAGTGGTTCAACTATACCTCAGAGGAACTTGGTTCTATCCAGGGTTGCAGCTAATGCATCTGGGAAGTCAAAACAACAGGACAATGATTTGGAAATTGATCCTTGGACGCTTTTAGAAGATGGTGCTGGATCTTACCCTTCTGCTGGTAATACTGCTAGCATAGGAAGTGGTGATCATGTTAATATTCGAGCTGCCAGCTGGCTTAAAGGGGCTGTAAGGGTGAGGCGGACAGACCTTACATATGTTGGTGCAGTGGATGACGATAGCTGA 6762 0.4253 MQRYHAGSCTSAVNNSTIGGPSARDTGRSDSPSLPANFSVSSRRQPPLNPYKLKCDKEPLNSRLGAPDFHPQTPTCPEETLTREYLQSGYRDAVEGLEEAREISLTQVPHFNKAVVLNCKEAIRKCLRAINESRAQKRKAGQVYGVALSGSQLARSGVFPELRPSGEDFRKKWIEGLSQQHKRLRSLADHVPHGYKRASLLEVLIRNNVPLLRATWFIKVTYLNQVRPGSVGISSGTADKIQLSRSEVWTKDVINYLQTLLDEFFSKNTSHSTPHSRERSPQVPYTGSLQHKSDPFLSVSDGEDPSLHFRWWYMVRLLQWHHGEGLLLSSLVIDWVLNQLQEKELLEVWQLLLPIIYGFLETIVLSQTYVRTLAGLALQVIRDPAPGGSDLVDNSRRAYTTYALIEMLRYLILVVPDTFVALDYFPLPSSIVSHSMNDGSFVLKSTESSGRIKNSSDDFGKIISCIQRHTEDLAKAANPGYPGHCLAKVAKALDKSLVLGDLRMAYKFLFEDLFGGTVSEGWVAKVSPCLRLSLKWFGTVNTPLIYSVFFLCEWATCDFRDFRSTPPHDIKFTGRKDLSQVHIAVRLLKMNMRDAKISFKQTNERIQRAGHFSKNSSQRHNWNYVGNVSKLKSSSKCVDQSTSPSVIFESPGPLHDIIVCWIDQHVVHRGEGPKRLHLFIVELISAGIFYPLAYVRQLIVSGIMDMNVNAVDLERQKRHYRILKQLPGRFVHDALEELGIVEGPQLKEALQIYLNERRLILRGPLSQSHDDASGANLSASKQKQYPASTKGGVLKVPIDQRRTAISNTISSKNAKDDANVEELKTAISVLLQLPNCLSNLSTTGSDESEGNVRKPIWSHYSKIDSVEATPGCEECSRAKRQRLNEERSSFVQGHSPVHSDDDDTWWVKKGMKSSEPLKVDQPQKSTKQVTKSRQKNVRKTQSLAQLAASRIEGSQGASTSHVCDNKVSCPHHRSATDGDGLRSVDSIRTSNYGDVVSIGKALKQLRFVEKRAIAVWLLTVVRQVVEEREKNLGKTGQFGRPFSMVEDRSSIRWKLGEDELSTILYLMDISDDLVSAVKFLLWLLPKVLNSPNSTIHSGRNVLMLPRNAENQVCDVGEAFLLSSLRRYENILVAADLIPEALSSAMHRAGTIIASNGRVSGSGSLAFARYLFKKYSNVASVIEWEKTFKTTCDARLSSELESGRVDGEIGLPLGVPAGIEDPDDFFRQKISGGRLPSRVGAGMRDIVQRNVEDAFPYLFGKDRKIFAAGTPKGPALEKWDSVYQIAQKIVMGLIDCIRQTGGAAQEGDPSLVSSAVSAIVVSVGPTLAKMPDFSSGNNHSNIMSGTSSLNYAGCILRMHITCLCLLKEALGERQSRVFDIALAAEASNALAGVFTPSKASRAQFQMSPEAHDTSNSISNDIGSNPNKVVVAKATKIAASVSALLVGAILYGVTGLERMVTVLRLKEGLDVVQFLRSTRSNSNGNARSVMAFKADSSIEVHVHWFRLLVGNCRTICEGLVAELLGEPSIMALSRMQRMLPLNLVFPPAYSIFAFVKWRPFIQNANVTVREDINQLYQSLTMAITDAIKHLPFRDVCFRDCQGLYDLMAANGSDSEFATLLELNGSDMHLKSTAFVPLRSRLFLNAMIDCKMPQSVYSKDDGSRISGPGESKIKFTDRESKLQDMLVHVLDTMQPAKFHWQWVTLRLLLNEQALIEKLESHDMSLADAIQLSSPSPEKAAAASENENNFIQILLTRLLVRPDAAPLFSELIHLFGRSLEDSMLLQAKWFLGGQDVLFGRKTIRQRLHNIAESKGLSVKAQFWEPWGWCSPCTDQGTIKGDKKKFDTASLEEGEVVEEGMDLKRCLRGLSQVSDTENSSCNQQQVTERALIELLLPCIDQSSDESRNSFANDLVKQLSYIEQQITAVTGGSKAVGAAPPGVEGQTNKVNNRKTMRGGSPGLARRPTMAADSSPPSPAALRASMSLRLQLLLRFLPILCTDREPSVRSMRQNLASVILRLLGSRVVHEDADISVNPVPSLLRREVESSSDVASTACVDSSSRGLFDRLFLVLHGLLSSYPPSWLRLKPITKTSNEPTREISVIDRELLETLQNDLDRMQLPDTIRWHIQAAMPILFPSMRCSLSCQPPTVSNSALVCFQPSNTNPGINSSGSTIPQRNLVLSRVAANASGKSKQQDNDLEIDPWTLLEDGAGSYPSAGNTASIGSGDHVNIRAASWLKGAVRVRRTDLTYVGAVDDDS* 2254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1329 2253 MobiDBLite consensus disorder prediction 1927 1973 - -
Apr10g1329 2253 MobiDBLite consensus disorder prediction 1 46 - -
Apr10g1329 2253 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1 2253 - -
Apr10g1329 2253 Pfam Transcription mediator complex subunit Med12 165 219 IPR019035 GO:0003712|GO:0006357|GO:0016592
Apr10g1329 2253 SMART Med12_2 158 219 IPR019035 GO:0003712|GO:0006357|GO:0016592
Apr10g1329 2253 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 1 2253 - -
Apr10g1329 2253 MobiDBLite consensus disorder prediction 886 905 - -
Apr10g1329 2253 MobiDBLite consensus disorder prediction 771 787 - -
Apr10g1329 2253 MobiDBLite consensus disorder prediction 913 940 - -
Apr10g1329 2253 MobiDBLite consensus disorder prediction 771 793 - -
Apr10g1329 2253 MobiDBLite consensus disorder prediction 918 940 - -
Apr10g1329 2253 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1329 Apr-Chr10 25638357 25656897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1329 - - gmx:100781696 3778.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1329 10 25638357 25656897 Apr10g1329 10 25638357 25656897 ECH