Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1323 ATGGCAACGGCGATACCCAAACGTAACTTCCCGTCGATAACCGAACGCAACGGAACGACGTCGTCACTGTCGCCGCGCGAGTCAATCGCTGCTGACCTCGACGGCACGCTTCTCATCTCCCGGAGCTCCTTCCCCTACTTCATGCTTGTCGCCGTCGAAGCGGGAAGCCTCCTCCGTGGCTTCCTTCTCCTTCTTTCAGTTCCATTCGTCATCTTCGCGTACCTCTTCGTCTCCGAAGCACTAGGCATCCAGATCCTCATCTTCATCTCCTTCTCCGGCCTCAAAATCCGCGACATCGAACTCGCCTCACGCGCCGTGCTTCCTAGGTTTTACGCTGCGGACGTGAGGAAGGAGAGCTTCGAGATGTTCGATCGGTGCAAGAGAAAGGTTGTGGTGACGGCGAACCCGACGGTGATGGTGGAGCCGTTCGTGAAGGACTTTCTCGGCGGAGACAAGGTGCTAGGAACGGAGATCGAGGTGAATCCGAAGACGAAGAAGGCTACGGGGTTCGTGAAGAAGCCTGGTGTGTTGGTCGGAAAGTTGAAGCGTTTGGCGATTTTGAAAGAGTTCGGCGAGGATTCGCCGGATATAGGAATCGGAGATCGTAAATCTGATCATGATTTCATGTCTATTTGCAAGGAGGGGTTCATGGTGCATCCAAGCAAATCAGCCAAACCAGTCCCACAAGAGCGTCTGAAGAGCAGGTTGATCTTCCACGACGGGCGTTTCGTCCAGAAGCCAGACCCACTAAACGCCATAATCACCTTCACATGGCTCCCCTTCGGCTTCATCCTCTCCATCATAAGGGTCTACTTCAACCTCCCTCTCCCCGAACGCATCGTTCGCTACACCTACGAAATGCTCGGCATTAAACTCATCATCCGCGGCCAACGTCCTCCGCCACCCTCTCCGGGCACCCCCGGCAACCTCTACGTCTGCAACCACCGCACCGCTCTCGACCCCATCGTCATCGCCATCGCTCTCGGCCGCAAAGTCTCCTGCGTCACCTACAGCGTAAGCAAGCTCTCCCGCTTCCTCTCCCCCATCCCCACCGTGGCCCTCACGCGCGACCGTGCTGCCGACGCTGCACGCATCACTGAGCTCCTCCAAAAGGGTGACCTTGTGGTGTGCCCAGAGGGCACCACGTGTCGCGAACCCTTCCTTCTCCGCTTCAGTGCTCTCTTTGCTGAGCTCAGTGACAGGATCGTGCCTGTTGCCGTTGATTGCAAGCAGAACATGTTCTTTGGGACCACCGTTCGTGGGGTCAAGTTCTGGGACCCTTACTTCTTCTTCATGAATCCTAGGCCTGTTTACGAGGTTACCTTCCTTGACCCTTTGCCGGAGGAGATGTCGGTCAAGGCCGGGGGAAAGACGTCCATTGAGGTGGCCAATCACGTGCAGAAGGTGTTGGGTGATGTGTTGGGGTTTGAGTGCACCGGGTTGACTAGGAAAGATAAGTATATGTTGCTGGGAGGGAATGATGGGAAGGTGGAGTCCATGTACAGTGCAAAGAAGGGATGA 1521 0.5595 MATAIPKRNFPSITERNGTTSSLSPRESIAADLDGTLLISRSSFPYFMLVAVEAGSLLRGFLLLLSVPFVIFAYLFVSEALGIQILIFISFSGLKIRDIELASRAVLPRFYAADVRKESFEMFDRCKRKVVVTANPTVMVEPFVKDFLGGDKVLGTEIEVNPKTKKATGFVKKPGVLVGKLKRLAILKEFGEDSPDIGIGDRKSDHDFMSICKEGFMVHPSKSAKPVPQERLKSRLIFHDGRFVQKPDPLNAIITFTWLPFGFILSIIRVYFNLPLPERIVRYTYEMLGIKLIIRGQRPPPPSPGTPGNLYVCNHRTALDPIVIAIALGRKVSCVTYSVSKLSRFLSPIPTVALTRDRAADAARITELLQKGDLVVCPEGTTCREPFLLRFSALFAELSDRIVPVAVDCKQNMFFGTTVRGVKFWDPYFFFMNPRPVYEVTFLDPLPEEMSVKAGGKTSIEVANHVQKVLGDVLGFECTGLTRKDKYMLLGGNDGKVESMYSAKKG* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1323 506 Pfam haloacid dehalogenase-like hydrolase 30 209 - -
Apr10g1323 506 SMART plsc_2 309 410 IPR002123 GO:0016746
Apr10g1323 506 SUPERFAMILY HAD-like 29 227 IPR036412 -
Apr10g1323 506 PANTHER BNAC05G00450D PROTEIN 7 504 - -
Apr10g1323 506 Gene3D - 106 233 IPR023214 -
Apr10g1323 506 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 224 495 - -
Apr10g1323 506 CDD LPLAT 310 446 - -
Apr10g1323 506 Pfam Acyltransferase 308 398 IPR002123 GO:0016746
Apr10g1323 506 PANTHER ANCIENT UBIQUITOUS PROTEIN 7 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1323 Apr-Chr10 25559481 25563743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1323 8 505 Acyl Lipid Metabolism Gene Families AT4G00400 80.561 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1323 K13508 - gmx:100794137 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1323 10 25559481 25563743 Apr10g1323 10 25559481 25563743 ECH