Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1322 ATGGCTATGAGTGCTTTCATTTCCAATCGCAACTTCGCTTCATTCGTTGCCTCAGGAAATGTATACAGATCAGGAAAGGATATATCTGTTCAAAGAGGGGGGATTTCTATTTCTGGTGTATCTGGTGCAAAGGATCCTTTCTCAAGATGCCAGCATATGATGTATTTCCCTTTGGAAGGGAGAGTTTCAAAACCAATGCCAATGTCTCACAACAAAGGAGAGCATTGTTCTCTTGCATCCTGGCAGTCCAGTCAATGCTTGAATTTTAAACTAAAGGCCAGCAGTCAATGTTCTGTCCTTTCTTCAGCTTCTTATAGAAGTAACTATGTTGAACAAGGGGAGGTCTATAGACTAGGTTTGAGCAAAAGAAAGCACCCACAAACTGAGGTTGGTAATGCTAATAAGTTTCGTGTTTGTTACAAGTCTGAGGAGTATGACATTGCAGAAGCAAAGATGGAATCGCTGCAATCAACTGAAGGGACTGGTGAAGCCATTCTTCTGGAAGGAAATCTACAACAAGTATCCCCTTGGTGGCAGCAGTTTCCTAAGCGCTGGGTTATTGTACTGCTGTGTTTTACAGCATTTCTGTTGTGTAACATGGATCGTGTAAATATGAGCATAGCAATACTTCCAATGTCACAAGAATTCAACTGGAACAGTGCAACAGTTGGTGTGATTCAATCATCTTTTTTCTGGGGTTATCTCCTTACTCAGATTGTTGGAGGCATATGGGCAGACAAACTTGGTGGTAAGCTAGTACTAGGTTTTGGAGTTGTCTGGTGGTCAATTGCAACAGTTTTAACACCTATTGCTGCAAGACTTGGATTGCCATGTCTGCTTATTATGCGTGCCTTTATGGGGATTGGCGAGGGTGTTGCAATGCCTGCCATGAATAATATGCTTTCCAAGTGGATTCCAGTATCAGAGAGAAGTAGATCACTTGCGCTTGTATACAGTGGCATGTACCTTGGTTCTGTCACAGGCTTGGCATTCTCACCTGTGCTAATCCAAAAATTTGGGTGGCCATCGGTGTTCTACACATTTGGATCCCTTGGAAGTATTTGGTTTGCTTTGTGGTTGCGTAAGGCATACAGCTCACCAAAAGAAGACCCAGATCTTCAGGCGGAAGAGAAGAAGCTCATACTTGGAGGCAGCGTATCAAAAGAACCCGTGTCAGTTATTCCTTGGAAATTAATTTTATCAAAAGCACCTGTCTGGGCTTTAATAATTTCTCACTTCTGCCACAATTGGGGGACCTTCATTCTATTAACCTGGATGCCAACATACTACAATCAGGTTCTGAAGTTCAACCTCACTGAATCTGGGCTCTTTTGTGTCCTGCCATGGTTAACCATGGCTGTGTTTGCAAATATAGGAGGCTGGATTGCTGACACACTTGTGAGCAAAGGCCTTTCCATAACATCTGTTCGAAAGATTATGCAATCAATTGGGTTTCTGGGTCCTGCATTTTTTCTTACACAGCTAAGCCATGTCAGAACACCCGCCATGGCAGTACTGTGCATGGCTTGCAGTCAGGGATCTGATGCATTCTCGCAATCTGGTCTATATTCCAATCACCAAGACATTGGACCACGCTATGCTGGAGTGTTGTTGGGACTATCAAATACCGCTGGAGTGCTTGCTGGTGTCTTTGGTACTGCTGCAACTGGATACATACTCCAACGAGGTTCTTGGGATGATGTATTTAAGGTTGCTGTTGCATTGTACATAATAGGCACCTTGGTGTGGAATGTCTTTTCAACTGGAGAGAGAGTTCTTGACTGA 1785 0.4342 MAMSAFISNRNFASFVASGNVYRSGKDISVQRGGISISGVSGAKDPFSRCQHMMYFPLEGRVSKPMPMSHNKGEHCSLASWQSSQCLNFKLKASSQCSVLSSASYRSNYVEQGEVYRLGLSKRKHPQTEVGNANKFRVCYKSEEYDIAEAKMESLQSTEGTGEAILLEGNLQQVSPWWQQFPKRWVIVLLCFTAFLLCNMDRVNMSIAILPMSQEFNWNSATVGVIQSSFFWGYLLTQIVGGIWADKLGGKLVLGFGVVWWSIATVLTPIAARLGLPCLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPVLIQKFGWPSVFYTFGSLGSIWFALWLRKAYSSPKEDPDLQAEEKKLILGGSVSKEPVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANIGGWIADTLVSKGLSITSVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVALYIIGTLVWNVFSTGERVLD* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1322 594 CDD MFS_SLC17A9_like 188 587 IPR044777 -
Apr10g1322 594 Gene3D MFS general substrate transporter like domains 392 592 IPR036259 -
Apr10g1322 594 Pfam Major Facilitator Superfamily 191 552 IPR011701 GO:0022857|GO:0055085
Apr10g1322 594 Gene3D MFS general substrate transporter like domains 182 372 IPR036259 -
Apr10g1322 594 SUPERFAMILY MFS general substrate transporter 173 586 IPR036259 -
Apr10g1322 594 ProSiteProfiles Major facilitator superfamily (MFS) profile. 187 591 IPR020846 GO:0022857
Apr10g1322 594 PANTHER SOLUTE CARRIER FAMILY 17 75 594 - -
Apr10g1322 594 PANTHER ASCORBATE TRANSPORTER, CHLOROPLASTIC 75 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1322 Apr-Chr10 25550742 25557801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1322 1 594 Organic Solute Cotransporters AT4G00370 72.391 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1322 K08193 - gmx:100793618 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1322 10 25550742 25557801 Apr10g1322 10 25550742 25557801 ECH
Apr4g2241 4 31429243 31434745 Apr10g1322 10 25550742 25557801 PCT