Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1308 ATGTCTACCATGAAGATCAATTTCAAAGACCCAGATCATCTTTACTCTTCATGGAGCTTTTCAAAGTTAATGGCTTTCTTTTTTCTCTTAATCTCCATCTCCTACCTCTTCTATTCCTTAAGATTCGTTAGCCATTCATATGATTGTGATCAAAACCCTCACATTCCTATTACTCATGTATCTGATACCCCATCTGAAGAAGAATCCGCACCCTTAAAACCCTTTGAAGAAACCAACATTTCCCACATAGTGTTTGGCATAGGAGCCTCGGCTAAGCTATGGAAGCATAGGAAAGAGTACATCAAGCTTTGGTGGAGACCTAAAGAGATGCGTGGAGTGGTGTGGCTTGAACAGAAGGTGAAAACTGAACATGGAGATGAAAGTTCCTTGCCCCCATTGAGGATCTCTGAGGACACTTCGAAGTTCAAGTATAAGAACCCAAAGGGGCATAGATCAGCTATTAGGATCTCACGCATAGTGTCAGAAACACTTAGGCTTGGGATGAAAGATCTGAGATGGTTTGTGATGGGGGATGATGACACAGTTTTTGTCACTGAAAATTTGGTTAAAGTTTTGCAAAAATATGATCACAATCAGTTTTATTACATTGGGAGCTCTTCAGAGAGCCACTTGCAAAATATTTATTTTTCTTATAATATGGCTTATGGAGGCGGTGGATTTGCCATTAGTTACCCTTTGGCTGTGGCATTGGAAAAAATGCAAGATAGGTGCATTCAGAGGTACCCTGGATTGTATGGTTCTGATGATAGGATTCAAGCTTGTATGGCTGAACTTGGGGTTCCACTCACCAAGGAGAGAGGGTTCCATCAGTTTGATGTGTACGGCAATCTCTTTGGGCTGCTAGCGGCCCATCCCATTACACCATTGGTATCACTCCATCACCTGGACGTGGTAGAGCCCATATTTCCAAATGTGAGCCGGGTCCAAGCCCTCAAGCGGCTCAAGGGGCCCATGAAGCTGGACCCGGCTGGGCTTGTGCAGCAATCCATTTGCTATGACAAAACCCGGACCTGGACCATATCCGTTTCATGGGGGTATGCGGTTCAAATTTTCCGGGGCATTTTCTCTGCCCGGGAGATGGAAATGCCGGCGAGGACCTTCCTTAACTGGTACAAGCGAGCCGATTACACCGCTTATCCGTTCAACACCCGGCCCGTCAGCCGCCATGTTTGTCAGAAACCGTTTGTTTATTACTTGTCAAATGCCATGCACAAGGGTGCTAATGACACTACTAGTCAGTATGTTCGGGTAAACCCGAACCCGGATTGCAAGTGGAAAATGGAGGATCCGACCCAAATCAAAGTAGTAGAGGTTTACAAGAAGCCTGACCCGCAATTGTGGGACAAGCAGGCTCCTAGAAGAAATTGCTGCAGGGTTCAAAGTTCTAAGAAGAAAGGAACTCTAGTGATTGATGTGGGGGAATGCAGGGAAGATGAAGTTGTTGAATTGTAG 1473 0.4521 MSTMKINFKDPDHLYSSWSFSKLMAFFFLLISISYLFYSLRFVSHSYDCDQNPHIPITHVSDTPSEEESAPLKPFEETNISHIVFGIGASAKLWKHRKEYIKLWWRPKEMRGVVWLEQKVKTEHGDESSLPPLRISEDTSKFKYKNPKGHRSAIRISRIVSETLRLGMKDLRWFVMGDDDTVFVTENLVKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRYPGLYGSDDRIQACMAELGVPLTKERGFHQFDVYGNLFGLLAAHPITPLVSLHHLDVVEPIFPNVSRVQALKRLKGPMKLDPAGLVQQSICYDKTRTWTISVSWGYAVQIFRGIFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRHVCQKPFVYYLSNAMHKGANDTTSQYVRVNPNPDCKWKMEDPTQIKVVEVYKKPDPQLWDKQAPRRNCCRVQSSKKKGTLVIDVGECREDEVVEL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1308 490 Gene3D - 72 322 - -
Apr10g1308 490 PANTHER FRINGE-RELATED 1 489 - -
Apr10g1308 490 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 1 489 - -
Apr10g1308 490 Pfam Protein of unknown function, DUF604 212 464 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1308 Apr-Chr10 25401661 25406337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1308 21 484 Glycosyltransferase AT5G41460 65.510 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1308 - - gmx:100789583 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2264 4 31681270 31684645 Apr10g1308 10 25401661 25406337 PCT