Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1295 ATGAAGAAGTTTGTACTCAAGTTAGATTTGCATGATGACAAGGATAAACAGAAGGCCCTGAAAATAGTCTCAACTCTTTCAGGTATTGATGCTATCTCTATGAATATGAAAGAGAAGAAATTAACAGTGATAGGAACAGTGGATCCAGTAAGTGTGGTGAGCAAATTGCGCAAATATTGGCAAACAGACATAGTAGCTGTAGGACCTGCCAAGGAGCCTGAGAAGAAAGAGGATCCTAAGAAAGAAGAAGCCAAGAAAGAGGGAGAAAATAAAGAAGAGCAAAAGAACGAAGAGGGCAAAAAAGAAGAACCAAAGAAAGAAGAGGAGAAAAAGAAAGAGGCACCACCAGATCCTGTTTTGGAACTGGTCAAAGCTTATAGGGCATATAATCCCCAAATGACCACACACTACTATGTTCAAAGCATAGAAGAGAATCCTAATGACTGTGTCATTTGTTAA 459 0.39 MKKFVLKLDLHDDKDKQKALKIVSTLSGIDAISMNMKEKKLTVIGTVDPVSVVSKLRKYWQTDIVAVGPAKEPEKKEDPKKEEAKKEGENKEEQKNEEGKKEEPKKEEEKKKEAPPDPVLELVKAYRAYNPQMTTHYYVQSIEENPNDCVIC* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1295 152 Coils Coil 81 101 - -
Apr10g1295 152 SUPERFAMILY HMA, heavy metal-associated domain 1 58 IPR036163 GO:0046872
Apr10g1295 152 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 152 - -
Apr10g1295 152 MobiDBLite consensus disorder prediction 67 119 - -
Apr10g1295 152 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 152 - -
Apr10g1295 152 MobiDBLite consensus disorder prediction 69 118 - -
Apr10g1295 152 Pfam Heavy-metal-associated domain 9 58 IPR006121 GO:0046872
Apr10g1295 152 Gene3D - 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1295 Apr-Chr10 25272617 25274988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1295 - - gmx:100499838 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1295 10 25272617 25274988 Apr10g1295 10 25272617 25274988 ECH
Apr4g2275 4 31804675 31807690 Apr10g1295 10 25272617 25274988 PCT