Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1289 ATGGCTTCCCTAATGTCACTGTTATCAAGAACAAGAAACCCTTGTTCCTATCTTGCGAGGCGCATTCGGTGCATGAGCAACTTGCCCGAGAACACGGTGTATTCAGGACCCACTCATCAGAACCCGAACCAGAGAGTGTCGCTGACCCTGTTGAGGCAAAAGCACCGAAACTCCCAACCAATCACAATGGTCACCGCCTACGATTACCCCTCAGCGGTGCATCTTGACATGGCCGCTATTGATATATGTCTCGTTGGAGACTCAGTTTCCATGGTGGTTCATGGACACGACACCACGCTACCCATCACGGTCGATGAAATGCTTGTTCATTGTCGTGCCGTTGCTCGTGGCGCTAAAAGGCCTCTTCTTGTTGGGGACTTGCCTTTTGGATCATATGAATCAAGTTCCGATCAGGCAGTGGATACAGCAGTTCGTATTTTAAAAGAAGGGGGAATGGATGCAATAAAATTGGAAGGAGGGTCTCCTTCGAGAATTGTTGCTGCAAAAGCTGTTGTTGAGGCTGGAATAGCAGTAATGGGGCATGTAGGGCTTACTCCCCAAGCAATTAGTGTTTTGGGGGGATTTAGACCTCAGGGAAGGAATGTTGCTAGTGCCATCAAGGTCGTGGAGACGGCATTGGCTTTGCAAGAAGCAGGGTGCTTTTCTGTTGTTCTAGAATGTGTGCCTGCACCAGTCGCTGCTGCAGCAACAGCAGCTCTTCAGATTCCTACCATTGGAATTGGGGCTGGACCCTTTTGCAGTGGACAGGTGCTAGTTTACCATGATTTGCTGGGCATGCTGCAACACCCCCACCATGCAAAGGTCACTCCAAAATTCTGTAAGCAGTATGCACGTGTTGGAGATGTCATCAATAAGGCCTTACTGCAGTATAAGGAAGACGTGGTAAATGGTTCATTCCCTGATGCTCACCATAGTCCATACAAAATCAGCAAAACAGATGCAGATGGTTTTTCAAATGAGTTGCAAAGGTTAGGTTTGGACAACGCAGCATCTGCAGCATCGGAAGCAGTTCAGAAAATGGATACAGATAAATAA 1056 0.4792 MASLMSLLSRTRNPCSYLARRIRCMSNLPENTVYSGPTHQNPNQRVSLTLLRQKHRNSQPITMVTAYDYPSAVHLDMAAIDICLVGDSVSMVVHGHDTTLPITVDEMLVHCRAVARGAKRPLLVGDLPFGSYESSSDQAVDTAVRILKEGGMDAIKLEGGSPSRIVAAKAVVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVASAIKVVETALALQEAGCFSVVLECVPAPVAAAATAALQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLQYKEDVVNGSFPDAHHSPYKISKTDADGFSNELQRLGLDNAASAASEAVQKMDTDK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1289 351 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 22 349 IPR003700 GO:0003864|GO:0015940
Apr10g1289 351 Gene3D - 43 325 IPR040442 -
Apr10g1289 351 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 46 311 IPR015813 GO:0003824
Apr10g1289 351 Pfam Ketopantoate hydroxymethyltransferase 46 308 IPR003700 GO:0003864|GO:0015940
Apr10g1289 351 TIGRFAM panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 47 312 IPR003700 GO:0003864|GO:0015940
Apr10g1289 351 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 22 349 - -
Apr10g1289 351 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 46 313 IPR003700 GO:0003864|GO:0015940
Apr10g1289 351 CDD KPHMT-like 51 307 IPR003700 GO:0003864|GO:0015940
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1289 Apr-Chr10 25185680 25188335 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1289 K00606 - gmx:100808841 595.119