Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1284 ATGGCAGAGACCGACCAAGCAAGACCTCTAGCCCCAGCTACAGATCACAGCAGCGACGATGAAGAGGCCCTCAAAAGCAAGCACCGTAGGAGAATCAAGGTATGTGGGTGCGTAACTGCAACCCTACTACTCCTAGTCATAGTAATTGTGATCTTAATATTCACAGTGCTTAAGGTCAAAGATCCCAAACTAACAACCAATGAGATCACACTCACAACACTTGACATCTCCATCAACAATGCAATTCCCCCTCAAGTTAAGGTGAACATGTCCATGTTGGTCGACATGTCCATTAAGAATCCTAACGCAGCATCGTTCAAATTTAATGAGAACTCCACCACAACTATCTTTTACCACGGCACATCAATCGCCGCCGTAAAAATTCCGTCGGGTTTAGCAAAGGCCCGCCGGACTTTGAGAATGAATGCGACGGTGGATATCATGGCGGATCGCCTTGCTAATTCTAGTCCGGATTTAGTGAAAGATGTGAGGAAGGGAGAGATGACCATGAACAGCTACTCGGTTATTCCAGGGAGAGTGAAGGTTTTGTTTGTTAAGAAACATGTTGAGATTAGGATGAATTGCACTTTGACGATTAATATTTCCAGCAGGGAAGTTCAGGATATGGCTTGCCAACGTAAGGTGAAACTTTAG 654 0.4495 MAETDQARPLAPATDHSSDDEEALKSKHRRRIKVCGCVTATLLLLVIVIVILIFTVLKVKDPKLTTNEITLTTLDISINNAIPPQVKVNMSMLVDMSIKNPNAASFKFNENSTTTIFYHGTSIAAVKIPSGLAKARRTLRMNATVDIMADRLANSSPDLVKDVRKGEMTMNSYSVIPGRVKVLFVKKHVEIRMNCTLTINISSREVQDMACQRKVKL* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1284 217 Pfam Late embryogenesis abundant protein 97 196 IPR004864 -
Apr10g1284 217 MobiDBLite consensus disorder prediction 1 22 - -
Apr10g1284 217 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 24 216 - -
Apr10g1284 217 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 24 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1284 Apr-Chr10 25157016 25157669 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1284 - - adu:107472891 254.218