Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1272 ATGATGCCTACATACAGAAGCATGGACTCATACCCATATCAAAGAAACCCAACACCCTTCCCTCATTGTTATCATCCTAGCATTGAGACTATTCCTCCTCAAATAAATATGGATCCATCCAAAGCACCCTTTTCTTATGATCAACATTGGCCTTGCTGTGGAAATTATGGGCACCCTATGCACCCCCATTTCTGTTGTGGCCACAATTATTTCCCAAATTTTTATGGCTATAGGCCTTCTTATCCTCATGCTCCAACACCAATGTACTATTCTGGAGGTTGTCCTGCATATGGTGAGCCATTTAATGTTCCTTATTCTCCACAACCACATTATACTATGGAGCTGCCTAGATATGAATATGATAAATATATGCCACGTGACCATCATTGTTGTTGGTGTCCTCATCTACCATGCAACCAAAAGGAAGGTAAAAGTGTGAAGATTGAAGCGCATGAACCTGATGGTGGAAAGCAAGTGAATGATGATTTGGTCCCAATTCAGTTCAGGAATTATCCATATCCCTTTGTTTGGGTTCCACCAGAGTACAAAAGTAATAGACAGCTGAAAAATCCTAATACAACTGAGGGGGGTGAGCAAAACAAGATATCTCATGATAGGACGCCTACTAGTCCTGAGAATTTTAGTGCTAATGTGAAGCCAGTGCAAGAGCCTAGAGTCTGGAATGGATGGTTACCCTTTGATATAAAGGGTGCTCCAAGCATGTTCCATGATGGATATGGAACAAGAAACCATAACCAGGAAACTGACAATAATAGAAAGGAATCAGAAGATGGAAGAATGAATCAAAAGCACCAAAGTGAACACAAGAGATCGGAATTCCCATTTATCTTCTGGTTGCCTTACTACAATAAACAGGAGGAAAGTGGAAAGACTAGCAACCATGAGAACGCTTCATCGTCGAAAATCATTGAGGAGGTGCTTCATACATCTAAATCTGTTCCAGTGAAGTCTCATGATGATGAAGGTGTTATGAATGAAAGAAGATCAAATCATGTTGAATCCACTAATATAGGTGCTTCTGATGTTGTTGAGAAAGTGAATAATGCTAGAAGCATCCCTGTGAAGCAGCTTGAATTGCATCGAGGAAAAAATGACTCACAGGGAAATGGCAAGAAAGAAATGATTGTTTCTCCAAATCAAGTGGAAGAAAATGTTACAAAGAAGGACTCTTGCACTGGTGACAAAAAGAGACAATCTACATCTCCATCAAAAGCATCCAAGTTACCTCCTGTTTGTCTGAGAATTGATCCACTACCAAGGAAGAAAAATGGTAATGGGAGTTCAAGGTCCCCAAGTCCACCTTCCTCAGAAGAACATTCCCAAGCCACAGCTGGTGAAAAATCCAAGACTCCTTCTTGTCACATGAATGACAACAAGGCTCAGTCAAATTCTAGTCTTCAGAATACTACAAACACTAGTGAGAAAGTTGAACCAAAGGTAAAAACCATTCAGGTGATGGAAAATAAGACAGGTGAAAACAAGGATGCTGATTATAAAGATGGATATCAAACCCACGTAAATGTAAACATACCCAGTGAAGTTCCAACAGGGACAAAGGAAACTTGTACAAATGGTGACACATATATGACTGAAGACAAAAAGGTAGAGAAAGGGGAAGAAAATAAGATGGAAGAAACTCAAGAAGTCAGGGAAGTGAAGGATACAAGCATTCCGGTTGATAAAGGTCAAAAAGAGAGAAGGGTTTTGTCAGATGCAGATGCTGCTGTTTTGATACAAGCTACATATCGCGGTTATCAAGTAAGAAAATGGGAACCATTGAAGAAATTGAAGCAGATAGATGAAATCAGAAAGGAGGTGACTGATGTTCAAGGCTGTGTTCAAGCTTTCCAGAGCTCTTCTGATCTTCAAAATGATGAGAAGCGAAAAATTGCAATTGGAGAGACCATAATGAGACTCCTGTTGCAGCTGGATACTATACAGGGTTTGCATCCAAGTTTCAGGGAGATCAGAAAATCCCTGGCAAAAGAGCTTACAACCTTGCAAGAACGGCTTGATTCTGTAATGGCCAAGAAAACACAGCAGCAGATGCAGGATTTCGTTGCTGAGAAGCCCATTGAAGTCACACCACTGAATATGCAGAAAGAAGAATGTGTGCAGGAGCAACAAAAAGAAAAGGTTGCAATACCAGTAGATTCATTTGAAGGCATTAAGGATGGCAGCAAAAGTCCTCGTGCTAGTGATGGTGCAAGTGAATCTCAGTCACCAATTCATGTTGCATCAAATGAGGGAACAAATCTTATTGCACCACTAAATGGCTTAGGTAATGAAGTTAACAGACAAGTGGTTATTGCTAATGATTCATTGAATTTTACAAGTGATCTATCTGAGACTGACAAAATGCTTGTGGAACCTGAAGTTAAATCAGAGGTGAACAACATTCCCATTGAGACTGATAAGCTAGATATGACTGTTTGGGAAGAATTACCGGTGGGAGTGATTGATGAAGATATCAATGATGTTAGCATTGCAAAGGATGAACATGATGATGTTAGTTCTGGAAGTCTCCTAGCCACGGATTCTGCAAATGATGGGTTAGGTTCGGTGATCCATGCAATGATGCAGTTACCAAAAGGATTGCTTGATGAGGATGAAAAGGATGGTGAAACAAATAATTCTAGAGGGGAAGCACAAGCAGAAACTGAGGAATGGGTTGAAGAGTTGTCAGTGAGACTTGATGAGGATTTGGAAAAATCTAAAGGTGAGAGCTATGATGGAGCTCAAACTTATGAAGAGGTTCTACCAGCTGAAGAAAGGGTAAGTAATGCAGATGAGAAAACAAGTTCTTCCACAGTAAAAGAAACTAAACCAGAAAAGCCACAAGAAGAAGAGCAGGAAGAGGTGCAATCTTCTGGGGAATCAGATGGTTGGGTAAAGATTGAATTTCAAAGAGAAGATGAACTCAAAGAGCATTCACCAGTGGATATAGAGGTTAAGTGTGAGACATGTGAGGAAGTTGGAATTGATACTAAGTTTCCATCTTTGATAACACAAGTTCATGATCATGAACTAGGAAATGGAGATGCATGCTTGGAAGCAAGCAATCTTATCAATGACTGGCACAAAGAAGATGAAAAAGAAGAAAAGGTTGCACAACGTGATGGAGGGTTAAATGGTGATGCAAAATTAGTGGAAGAGAATGAGAAGTTAAGGGAGATGACGAAGAAGTTGCTGGAAACTGGGAATGAACAGTTGAGTGTAATATCAGATTTGACTGGTAGAGTGAAGGACTTGGAGAAAAAATTAGCTAAGAGCAGGAGTAAGCGATTAAAGACAAAGCGATATAGACCTGCAACTTCAAAGATGTCTTGCATGAAATCTTCCAAATAA 3369 0.4001 MMPTYRSMDSYPYQRNPTPFPHCYHPSIETIPPQINMDPSKAPFSYDQHWPCCGNYGHPMHPHFCCGHNYFPNFYGYRPSYPHAPTPMYYSGGCPAYGEPFNVPYSPQPHYTMELPRYEYDKYMPRDHHCCWCPHLPCNQKEGKSVKIEAHEPDGGKQVNDDLVPIQFRNYPYPFVWVPPEYKSNRQLKNPNTTEGGEQNKISHDRTPTSPENFSANVKPVQEPRVWNGWLPFDIKGAPSMFHDGYGTRNHNQETDNNRKESEDGRMNQKHQSEHKRSEFPFIFWLPYYNKQEESGKTSNHENASSSKIIEEVLHTSKSVPVKSHDDEGVMNERRSNHVESTNIGASDVVEKVNNARSIPVKQLELHRGKNDSQGNGKKEMIVSPNQVEENVTKKDSCTGDKKRQSTSPSKASKLPPVCLRIDPLPRKKNGNGSSRSPSPPSSEEHSQATAGEKSKTPSCHMNDNKAQSNSSLQNTTNTSEKVEPKVKTIQVMENKTGENKDADYKDGYQTHVNVNIPSEVPTGTKETCTNGDTYMTEDKKVEKGEENKMEETQEVREVKDTSIPVDKGQKERRVLSDADAAVLIQATYRGYQVRKWEPLKKLKQIDEIRKEVTDVQGCVQAFQSSSDLQNDEKRKIAIGETIMRLLLQLDTIQGLHPSFREIRKSLAKELTTLQERLDSVMAKKTQQQMQDFVAEKPIEVTPLNMQKEECVQEQQKEKVAIPVDSFEGIKDGSKSPRASDGASESQSPIHVASNEGTNLIAPLNGLGNEVNRQVVIANDSLNFTSDLSETDKMLVEPEVKSEVNNIPIETDKLDMTVWEELPVGVIDEDINDVSIAKDEHDDVSSGSLLATDSANDGLGSVIHAMMQLPKGLLDEDEKDGETNNSRGEAQAETEEWVEELSVRLDEDLEKSKGESYDGAQTYEEVLPAEERVSNADEKTSSSTVKETKPEKPQEEEQEEVQSSGESDGWVKIEFQREDELKEHSPVDIEVKCETCEEVGIDTKFPSLITQVHDHELGNGDACLEASNLINDWHKEDEKEEKVAQRDGGLNGDAKLVEENEKLREMTKKLLETGNEQLSVISDLTGRVKDLEKKLAKSRSKRLKTKRYRPATSKMSCMKSSK* 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1272 1122 MobiDBLite consensus disorder prediction 185 216 - -
Apr10g1272 1122 MobiDBLite consensus disorder prediction 1095 1122 - -
Apr10g1272 1122 MobiDBLite consensus disorder prediction 1037 1058 - -
Apr10g1272 1122 ProSiteProfiles BAG domain profile. 605 682 IPR003103 GO:0051087
Apr10g1272 1122 MobiDBLite consensus disorder prediction 184 216 - -
Apr10g1272 1122 MobiDBLite consensus disorder prediction 377 393 - -
Apr10g1272 1122 SUPERFAMILY BAG domain 597 681 IPR036533 GO:0051087
Apr10g1272 1122 MobiDBLite consensus disorder prediction 243 276 - -
Apr10g1272 1122 MobiDBLite consensus disorder prediction 249 276 - -
Apr10g1272 1122 MobiDBLite consensus disorder prediction 875 983 - -
Apr10g1272 1122 Gene3D BAG domain 587 687 IPR036533 GO:0051087
Apr10g1272 1122 Pfam BAG domain 606 680 IPR003103 GO:0051087
Apr10g1272 1122 SMART BAG_1 605 682 IPR003103 GO:0051087
Apr10g1272 1122 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 6 20 1121 - -
Apr10g1272 1122 Coils Coil 1056 1076 - -
Apr10g1272 1122 MobiDBLite consensus disorder prediction 723 751 - -
Apr10g1272 1122 MobiDBLite consensus disorder prediction 930 959 - -
Apr10g1272 1122 Pfam IQ calmodulin-binding motif 580 597 IPR000048 GO:0005515
Apr10g1272 1122 MobiDBLite consensus disorder prediction 892 918 - -
Apr10g1272 1122 Coils Coil 664 684 - -
Apr10g1272 1122 ProSiteProfiles IQ motif profile. 578 607 IPR000048 GO:0005515
Apr10g1272 1122 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 20 1121 IPR040400 -
Apr10g1272 1122 Coils Coil 1081 1101 - -
Apr10g1272 1122 Coils Coil 542 562 - -
Apr10g1272 1122 MobiDBLite consensus disorder prediction 430 485 - -
Apr10g1272 1122 MobiDBLite consensus disorder prediction 322 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1272 Apr-Chr10 25085908 25091317 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1272 - - gmx:102668563 1303.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1272 10 25085908 25091317 Apr10g1272 10 25085908 25091317 ECH