Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1270 ATGGAAGGAAGAGAAAAAGGTGAAGAGAGAGAGGACAAAAGGGGTGGATTAATGGTGGAAAAGTTGAAGCAAAGAGTGGTTTTGGTGGGGAAAAAGGGTGGCCCTTGTACTCCACCACCCACATGGAGACTTGAACTTCCATCTCAGCATAATAGTCTTGCTAATCACAAGGTTGAAGAATTCCTCACCTTTCACACTTCAACTGTTTCGGCTAGAAAGCTCTGTGCCAATCTCTGGGAACTTCTGCCCCACCAACACCCCCCACTTCCCAAAATGAACAACAAGCCTGGAACCACCCTCCGCCGCCGTCGCCGCCGCCGTCACCGCCTCCATCCTAAGGACACAGCTTCTGAAGTGAACAACCAAGTGGCTCAGCCCCCGGACACCCCTTCTGATTCTGATCAGGTTGCACCATATAAATGTGCAGTAACTCCCACAAGCTCCATAGACTTCAAAGGTATGATTGGAGAGTCAAATGGCAACCTCAAAACATCCACGGAATTGCTTAAGGTTCTCAATCGTATCTGGAGTCTTGAAGAACAGCATGCATCAAATATATCAGTAGTAAAAGCCTTAAAAATGGAACTAGATCACTCTCAAGCGCGAATAAAGGAATTACTACTAGAGAAGCAAATGAATAAGCAGGAAATGGAGAACTTTATAAAAGAAATGACAGTGGACAAACTTGTTAGGAAGAACAAAGAACATGACAGAATTAAAGCTGCCATTGAATCAATCAAGGAAGAGCTAGAAAATGAGAGGAGGTTACGGAAGCATTCAGAAAACTTGCATCGAAAGCTGGCCAGGGAGCTTTCGGAAGTAAAGTCTTCATTCACTGGCTGTTTAAGAAATCTTGAAAGAGAGAGAAAAGCACGAATCCTTTTGGAGAACTTGTGCGATGAGTTTGCCAAGGGGATAAGAGATTATGAACAAGAGGTACATTCTCTTAGGCGGAATTCTGATAAGTGTCAGGTTAAAGGGAATAACCTTGACAGGCTAATACTTCATATTTCAGAAGCTTGGCTTGACGAGCGCATGCAGATGAAGCTAGCTCAATCTGGCAGCGATTTAATAGAGAGAAATTCAATCGTTGACAAGCTAGGTTTTGATATTGAAACATTTCTGCATGCAAAACGATCAGTTGATTTGAAAAAATACGGTTACTCTTCCCCGAAGGAGCTCAAGGAAATCCACCCTTGTCATTCATTGGATTCCTTTCCACTAAAAGACTCTGGAAGTGCACCTCAGAATATGACTCAGGAAGATTCCATTGACACCCACTTTTTTGAACCACAAAGGGTTGCTGGCAATGGACTCGACAAACCCAACTCGAAACACATGTTGTGTGATGATGATGAGAGTTGCTTTGTGAAGAGGAAACCAAGTGAAATAGAAGACATCAATTCTCTATTAAATGAAGAGGCCAAACAAAATCCACAAGAAAGTGATGGACCTTGGATCCTGAGAATGAACTCAAGTCACAGGCCTGATAACCTGATTGGAAACAGTTCCTTGTCATCAGAAGGTGATAAAGTTTATCCTGAAAGTATTTGCAAGGAAGATTCTTTTGTTCAATCTGTAGTTACTGCCAATGCTAATAGCCCTGCAATACTGTGGAAATCAAAGTTGAGTGTTTCAGATTTTGACAAGTCTGAGTCTTCTACCAAATTGCCTAAGGGTGTAAAGGAAAACACATTGATGGCAAAACTACTTGAAGCAAGATTAGAGGGACAGAAATCTCGCTCCAGAGCTAGCAAAAACACTTCTTGA 1770 0.4243 MEGREKGEEREDKRGGLMVEKLKQRVVLVGKKGGPCTPPPTWRLELPSQHNSLANHKVEEFLTFHTSTVSARKLCANLWELLPHQHPPLPKMNNKPGTTLRRRRRRRHRLHPKDTASEVNNQVAQPPDTPSDSDQVAPYKCAVTPTSSIDFKGMIGESNGNLKTSTELLKVLNRIWSLEEQHASNISVVKALKMELDHSQARIKELLLEKQMNKQEMENFIKEMTVDKLVRKNKEHDRIKAAIESIKEELENERRLRKHSENLHRKLARELSEVKSSFTGCLRNLERERKARILLENLCDEFAKGIRDYEQEVHSLRRNSDKCQVKGNNLDRLILHISEAWLDERMQMKLAQSGSDLIERNSIVDKLGFDIETFLHAKRSVDLKKYGYSSPKELKEIHPCHSLDSFPLKDSGSAPQNMTQEDSIDTHFFEPQRVAGNGLDKPNSKHMLCDDDESCFVKRKPSEIEDINSLLNEEAKQNPQESDGPWILRMNSSHRPDNLIGNSSLSSEGDKVYPESICKEDSFVQSVVTANANSPAILWKSKLSVSDFDKSESSTKLPKGVKENTLMAKLLEARLEGQKSRSRASKNTS* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1270 589 MobiDBLite consensus disorder prediction 97 111 - -
Apr10g1270 589 MobiDBLite consensus disorder prediction 472 487 - -
Apr10g1270 589 MobiDBLite consensus disorder prediction 472 493 - -
Apr10g1270 589 MobiDBLite consensus disorder prediction 84 138 - -
Apr10g1270 589 MobiDBLite consensus disorder prediction 116 132 - -
Apr10g1270 589 Coils Coil 299 326 - -
Apr10g1270 589 Coils Coil 189 223 - -
Apr10g1270 589 PANTHER GB|AAF24581.1 127 587 IPR043424 -
Apr10g1270 589 PANTHER GB|AAF24581.1 3 118 IPR043424 -
Apr10g1270 589 Coils Coil 229 263 - -
Apr10g1270 589 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 127 587 - -
Apr10g1270 589 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 3 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1270 Apr-Chr10 25049573 25054584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1270 - - gmx:100805864 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1270 10 25049573 25054584 Apr10g1270 10 25049573 25054584 ECH
Apr4g0890 4 7174625 7178748 Apr10g1270 10 25049573 25054584 PCT