Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1265 ATGGGTCGTCCATTGCTACCTTTAACAACATTAGCTTTTGTAAGCAATCGATCAAGAGTGAAAGAAAAGAAAATGAGTACCCTTAAGTTTTTCAACAAATTAAATATATTTTCTAAGTTCTTAGTAATTTGCATGATGGTATCTCTTTTGGTTGGTTCAAGTTATTCAGCATGTGATTTTAAGGCAATTTTCAACTTTGGGGATTCAAATTCGGACACAGGTGGGTTTCATGCAGCTTTCCCTGCACAGCCTCGTCCCTATGGAATGACTTATTTCAAAAAACCAGCAGGACGGGCTTCTGATGGTAGGCTCATTGTGGATTTTCTAGCCCAGGCTCTTGGATTGCCATATTTGAGCCCATATTTGCAGTCAATTGGATCAGACTATACAAATGGGGCTAACTTTGCAAGTTCAGCATCTACTGTGCTTCAGCCCACTACTTCCTTCTTTGTCAGTGGGCTCAGCCCTTTTTCCCTTGCCATACAACTAAGGCAAATGGAGCAATTCAAAGCCCAAGTTGATGAATCACATCAAAAGGGAACAATGATATCATCTGATGGTTCTTCTGGAACGAAAATTCCTTCACCAGATATATTTGGAAAGGCAATTTATACATTCTATATTGGTCAAAATGACTTCACATCCAAAATAGCAGCCACTGGTAGCATTGATGGAGTGAGGCACAACCTTCCTCAAATTGTCTTACAAATTGATGCTGCTATTAAGGAGCTATATGTACAAGGTGGGCGTACATTTATGGTATTCAATCTTGGTCCGGTAGGATGCTACCCTGGATACTTGGTGGAGCTTCCTCATGCAAACTCTGACTTTGATGAGTTTGGATGCATGATTTCTTACAACAATGCTGTGCATGATTATAACAAATTGTTGAAGGAGACATTGAGTCAAACCAGAAAAAGTTTAATAGATGCTTCCCTTGTTTATGTGGACACCAACTCTGCTTTATTAGAACTCTTCCACCATCCCACTTATTACGGGCTAAAGTATGGTAGTAGAGCATGCTGTGGGCATGGGGGTGGTGACTACAACTTTGACCCTAAAATTTTGTGTGGCAATATGGTTGCAAGTGCCTGTGATGACCCTGAAAACTATGTGAGCTGGGATGGCATCCATTTCACAGAAGCAGCGAACAAGCTTGTTGCAATGGCAATTATCAATGGCTCACTTTTTGATCCCCCTTTCCCTCTTCATGAACACTGTGACCTCCAACCTATTATTGATTGA 1245 0.408 MGRPLLPLTTLAFVSNRSRVKEKKMSTLKFFNKLNIFSKFLVICMMVSLLVGSSYSACDFKAIFNFGDSNSDTGGFHAAFPAQPRPYGMTYFKKPAGRASDGRLIVDFLAQALGLPYLSPYLQSIGSDYTNGANFASSASTVLQPTTSFFVSGLSPFSLAIQLRQMEQFKAQVDESHQKGTMISSDGSSGTKIPSPDIFGKAIYTFYIGQNDFTSKIAATGSIDGVRHNLPQIVLQIDAAIKELYVQGGRTFMVFNLGPVGCYPGYLVELPHANSDFDEFGCMISYNNAVHDYNKLLKETLSQTRKSLIDASLVYVDTNSALLELFHHPTYYGLKYGSRACCGHGGGDYNFDPKILCGNMVASACDDPENYVSWDGIHFTEAANKLVAMAIINGSLFDPPFPLHEHCDLQPIID* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1265 414 CDD SGNH_plant_lipase_like 62 395 IPR035669 -
Apr10g1265 414 Gene3D SGNH hydrolase 52 395 IPR036514 -
Apr10g1265 414 SUPERFAMILY SGNH hydrolase 63 393 - -
Apr10g1265 414 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 30 411 - -
Apr10g1265 414 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 30 411 - -
Apr10g1265 414 Pfam GDSL-like Lipase/Acylhydrolase 63 391 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1265 Apr-Chr10 24997900 25003741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1265 62 402 Acyl Lipid Metabolism Gene Families AT4G10950 27.966 1.95e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1265 - - aprc:113850566 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1265 10 24997900 25003741 Apr10g1265 10 24997900 25003741 ECH