Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1258 ATGGAGATTGGGTTCTTGGGTTTGGGGATAATGGGGAAGGCCATGTCAATCAACCTGCTACGCCACGGTTTCAAGGTCACTGTTTGGAACAGAACTCTCTCCAAGTGTGATGAACTTGTGGAACATGGTGCTTCTGTTGGAGAAACTCCAGCAGCCGTAGTCAAGAAATGCAAGTATACAATTGCAATGTTATCCGATCCTTCAGCTGCTTTATCGGTCGTATTTGATAAAGATGGTGTTCTTGAGCATATTAAGGGAAAAGGTTATGTTGACATGTCCACAGTTGATGCTGATACATCTTCCAAGATATCTGAGGCCATCAAAGCAAAAGGCGGTTACTTCCTTGAAGCTCCTGTTTCAGGTAGCAAGAAGCCTGCAGAAGATGGCCAACTAGTTATACTTGCTGCAGGAGATAAGCCATTGTATGAGGAAGCACATCCAGCATTTGATGTACTGGGGAAAAAATCTTTCTTTCTGGGTGCAGTTGGAAATGGTGCAAAAATGAAACTTGTTGTTAACATGATAATGGGCAGTATGATGAATGCTTTCTCTGAGGGACTCACACTAGCTGAAAGAAGTGGTTTGAACCCTGGAACTCTTCTTGATGTGCTGGATCTTGCTGCCATAAGTAATGCCATGTTTAGATTGAAAGGACCCTCGATGCTCGGAAACAATTACTCCCCAGCTTTTCCACTGAAACACCAGCAGAAGGACATGAGATTGGCTCTTGCCCTTGGAGATGAAAATGCTGTACCAATGCCTGTAGCAGCTGCAGCAAATGAGGCTTTCAAGAAAGCGAGAAGCATGGGATTGGGAGACCTTGATTTTTCAGCAGTACATGAGACTTTGAAAGCTCTTGACCATTCTTCTTGA 873 0.4399 MEIGFLGLGIMGKAMSINLLRHGFKVTVWNRTLSKCDELVEHGASVGETPAAVVKKCKYTIAMLSDPSAALSVVFDKDGVLEHIKGKGYVDMSTVDADTSSKISEAIKAKGGYFLEAPVSGSKKPAEDGQLVILAAGDKPLYEEAHPAFDVLGKKSFFLGAVGNGAKMKLVVNMIMGSMMNAFSEGLTLAERSGLNPGTLLDVLDLAAISNAMFRLKGPSMLGNNYSPAFPLKHQQKDMRLALALGDENAVPMPVAAAANEAFKKARSMGLGDLDFSAVHETLKALDHSS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1258 290 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 281 IPR029154 GO:0051287
Apr10g1258 290 Gene3D - 1 161 - -
Apr10g1258 290 Gene3D - 162 285 IPR013328 GO:0016491
Apr10g1258 290 PIRSF HIBADH 1 290 IPR015815 GO:0016491
Apr10g1258 290 PANTHER OXIDOREDUCTASE GLYR1-RELATED 2 283 - -
Apr10g1258 290 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 5 18 IPR002204 GO:0016491
Apr10g1258 290 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 2 157 IPR006115 GO:0050661
Apr10g1258 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 161 IPR036291 -
Apr10g1258 290 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 162 285 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1258 Apr-Chr10 24956095 24960222 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1258 K18121 - gmx:100802847 513.457