Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1257 ATGTTATTGTGTTTTCCATCACCATCATCACTGTTTTCCAACATGTCAGAGATGACGATGAAGAAGAAACAGATGAAGGAGGTTATTGGGGTGAGGAAAAAGGAAGAGTCTTTGGTGGAAGTGGAAGACATAGAAGACACACTCTCCTTCTCCAAAGATGAGACCCTCGAACTCAGAGTGGCTCTTTTGGATTGGTATGATCTCAACCAAAGGGACCTTCCTTGGAGGACCACCTTCAAACATGGCCATGAAGATGATGAAGAAAAAGTGGAAAGAAGAGCTTATGGCGTGTGGGTCTCTGAGGTTATGTTGCAGCAAACGAGGGTTCAGACTGTTATTGCCTATTACAACCGTTGGATGCAAAGATGGCCCACCATTCACCATCTTGCACAAGCTTCTCTTGAGGAAGTAAATGAGATGTGGGCAGGTTTGGGCTACTATCGAAGAGCTCGTTTTCTTTTAGAGGGGGCTAAGAAAATAGTTGCAGAAGGAGGCAGAATTCCTAAAGTTGCTTCTATGCTACGAAAGATTCCAGGAATTGGAGACTACACATCTGGAGCAATTGCTTCTATTGCATTTAAAGAGGTGGTACCTGTTGTTGATGGAAATGTGATAAGGGTGATTGCTAGACTAAGGGCCGTTTCTGCAAATCCAAAAGACTCAGTAACCATTAAGAGATTTTGGAAATTAGCAGCTCAGTTGGTTGATCCTCTTCGTCCTGGGGACTTCAATCAGGCTCTCATGGAACTTGGGGCAACTGTATGCACCCCTTTGAACCCAAGTTGTTCCTCATGTCCAGCATCAGAATTTTGTCGTGCGCTATCGATTACTAAACATGATAGTACAATTGCAGTAACAGATTACCCTGTTAAGGGTGTGAAGGTTAAACAAAGAAGTGATTTTTCTGCTGTATGTGTTGTTGAATTACTTGGAGCTGAAACATTGTTAGATGAAAACCAGTCTAGCAGCAAATTTATTCTTGTAAAACGGCCTGATGAAGGATTGCTTGCTGGTCTCTGGGAGTTTCCATCAGTCTCACTGGATGGAGAAACTGTTGCATTGGCTAGAAGAAAAGCAATGGATAGCTTCTTGAAAAAGGATCTCAAAATTGACATCAAGAAAACTTGCAATATAGTTTTGAGGGAAGATATTGGGGAATTTGTTCACATTTTCAGTCATATTCGTCTCAAGTTGTATGTTGAATTGCAAGTTTTACAATTGAAAGGGGGAGTTGATGATTTGTTCAAAAGCCAGGACAAAGAAACTACAACTTGGAAATGTGTTGATGGCAATGTGCTTTCTAGTATGGGACTGACAACCAGTGTAAGAAAGGTGTATAACATGGTTCAAAAATTTAAGCAGAAAAGTGTTCCTTCTAACTGTGTGCCAACCAAGAAGAGAACGAGAACAACCAAGAGAAACTAG 1425 0.4133 MLLCFPSPSSLFSNMSEMTMKKKQMKEVIGVRKKEESLVEVEDIEDTLSFSKDETLELRVALLDWYDLNQRDLPWRTTFKHGHEDDEEKVERRAYGVWVSEVMLQQTRVQTVIAYYNRWMQRWPTIHHLAQASLEEVNEMWAGLGYYRRARFLLEGAKKIVAEGGRIPKVASMLRKIPGIGDYTSGAIASIAFKEVVPVVDGNVIRVIARLRAVSANPKDSVTIKRFWKLAAQLVDPLRPGDFNQALMELGATVCTPLNPSCSSCPASEFCRALSITKHDSTIAVTDYPVKGVKVKQRSDFSAVCVVELLGAETLLDENQSSSKFILVKRPDEGLLAGLWEFPSVSLDGETVALARRKAMDSFLKKDLKIDIKKTCNIVLREDIGEFVHIFSHIRLKLYVELQVLQLKGGVDDLFKSQDKETTTWKCVDGNVLSSMGLTTSVRKVYNMVQKFKQKSVPSNCVPTKKRTRTTKRN* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1257 474 CDD ENDO3c 95 251 IPR003265 GO:0006284
Apr10g1257 474 SUPERFAMILY DNA-glycosylase 57 274 IPR011257 GO:0003824|GO:0006281
Apr10g1257 474 SMART endo3end 103 253 IPR003265 GO:0006284
Apr10g1257 474 PANTHER ADENINE DNA GLYCOSYLASE 23 470 IPR044298 GO:0006284|GO:0016798
Apr10g1257 474 Pfam NUDIX domain 323 445 IPR029119 -
Apr10g1257 474 Gene3D - 58 273 IPR023170 -
Apr10g1257 474 SUPERFAMILY Nudix 322 450 IPR015797 -
Apr10g1257 474 SMART ccc3 254 274 IPR003651 GO:0051539
Apr10g1257 474 CDD DNA_Glycosylase_C 324 449 IPR029119 -
Apr10g1257 474 Pfam HhH-GPD superfamily base excision DNA repair protein 99 231 IPR003265 GO:0006284
Apr10g1257 474 Gene3D Hypothetical protein; domain 2 72 198 - -
Apr10g1257 474 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 294 457 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1257 K03575 - gmx:100818278 752.666