Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1254 ATGCCTTCTTTCACTTCTCTTCCTCCGTGGCTATGCCTATGGCTGGTGCTGGCCGTGATTGTGTTCACGGCCACACCATCTCCGGCACGTGCCTCGGTGGTGGAGTTGGAAGGAGAAGGATTGAGGTCTCAGCGAGAGTTTGATTATTTCGTGTTGGCGTTGCAATGGCCTGGCACTTACTGTCATCGCACCAGCCATTGCTGTTCCTCTAATGCTTGCTGCAGAGGCTCCAATTCTCCAACAATTTTCACTATACATGGACTCTGGGCTGACTATAATGATGGAACCTGGCCAGCCTGTTGCTCTGGGCCTAGTTTTAATCCCAAAGAGATATCGACTTTGACTAATGCTTTAGAGCAATATTGGCCGTCATTGAGCTGTAGCTCGCCATCAACGTGCCATGGTGGGAAAGGTTCATTTTGGGCTCACGAGTGGGAGAAACATGGCACATGCTCTTATCCTGTGATTCGGAATGAATATGATTATTTCCTGACAACGCTGAATGTCTACTTCAAATATAATGTTACGAGTGTTCTAAATGATGCTGGATATGTTCCGTCTAATACAGAGAAGTATCCCCTTGGAGGCATTATCTCTGCCATTGAGAATGCTTTTCATGCATCTCCTTTAATAGTTTGCTCAAAAGATTCTATTGAGGAACTTCGCCTATGCTTTTATAAGGACTTCAAGCCACGAGATTGCGCTGTTGGACCTAACATTAAAATTGACATGGTTACTTCAAAAGGATCTTGTCCCAAATATGTTCGCTTGCCTGAACTCGTATCAGCACGGCATGATGGACTTCAAAGGCGGGTCTTTGATGACGCAGCTCTTTAA 837 0.4564 MPSFTSLPPWLCLWLVLAVIVFTATPSPARASVVELEGEGLRSQREFDYFVLALQWPGTYCHRTSHCCSSNACCRGSNSPTIFTIHGLWADYNDGTWPACCSGPSFNPKEISTLTNALEQYWPSLSCSSPSTCHGGKGSFWAHEWEKHGTCSYPVIRNEYDYFLTTLNVYFKYNVTSVLNDAGYVPSNTEKYPLGGIISAIENAFHASPLIVCSKDSIEELRLCFYKDFKPRDCAVGPNIKIDMVTSKGSCPKYVRLPELVSARHDGLQRRVFDDAAL* 279
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1254 278 Pfam Ribonuclease T2 family 47 234 IPR001568 GO:0003723|GO:0033897
Apr10g1254 278 Gene3D - 43 262 IPR036430 GO:0003723|GO:0033897
Apr10g1254 278 PANTHER RIBONUCLEASE 2-LIKE ISOFORM X1 40 265 - -
Apr10g1254 278 SUPERFAMILY Ribonuclease Rh-like 46 258 IPR036430 GO:0003723|GO:0033897
Apr10g1254 278 PANTHER RIBONUCLEASE T2 40 265 IPR001568 GO:0003723|GO:0033897
Apr10g1254 278 ProSitePatterns Ribonuclease T2 family histidine active site 2. 140 151 IPR033130 -
Apr10g1254 278 CDD RNase_T2_euk 47 234 IPR033697 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr10g1254 Apr-Chr10 24937336 24944239 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1254 K01166 - gmx:100789614 458.759